PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1626
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
Orhiscaffold1030004000.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold10610007780.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold10630007900.2 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold11250014280.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold1160016920.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold12290023200.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold12450024680.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold12560025520.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold12560025530.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold12620026070.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold12950028650.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold13240031380.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold13500033950.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold13770035910.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold14200040180.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold14510042560.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold14510042570.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold15100046890.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold17380063400.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold17790066060.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold17910066780.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold17980067230.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold18040068120.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold18480070940.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold19210075990.1 Steroid BR6OX2/CYP85A2 medium borderline
Orhiscaffold2050085550.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold210088480.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold21910094590.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold22060095580.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold22790099700.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold22800099920.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold2470111550.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold25710117360.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold260119140.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold26130119900.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold27580127680.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold2780128720.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold28100130210.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold28890134020.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold29810138600.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold29810138620.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold30000140220.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold30060140510.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold30190141260.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold31280146860.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold32360152040.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold32420152430.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold32580152960.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold3300155250.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold3300155260.1 Steroid BR6OX2/CYP85A2 low borderline