PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1626
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
Orhiscaffold11810019300.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold12450024660.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold12450024680.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold12620026080.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold12950028660.1 Alkaloid G8O/G8H low borderline
Orhiscaffold13090030000.1 Alkaloid G8O/G8H low borderline
Orhiscaffold13500033950.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold13770035910.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold14740044020.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold14740044030.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold150045840.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold150045850.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold150045860.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold17790066050.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold19210075990.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold2010082890.1 Alkaloid G8O/G8H low borderline
Orhiscaffold21740093560.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold23510104740.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold25710117360.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold2630120650.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold28100130220.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold28380131360.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold29230135680.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold29810138600.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold29810138620.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold30880144530.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold31980149850.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold32420152430.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold3300155270.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold37340174250.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold40520186820.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold50870223100.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold51610225860.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold55690236650.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold6020248830.2 Alkaloid G8O/G8H medium borderline
Orhiscaffold62830255930.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold69190272120.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold76790286750.1 Alkaloid G8O/G8H low borderline
Orhiscaffold7960292460.1 Alkaloid G8O/G8H low borderline
Orhiscaffold85120301650.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold8730304720.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold88340306130.1 Alkaloid G8O/G8H medium pass
Orhiscaffold90740309800.1 Alkaloid G8O/G8H medium pass
Orhiscaffold9390314240.1 Alkaloid G8O/G8H medium borderline