PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1626
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status
Orhiscaffold11050012360.1 Phenylpropanoid CSE medium pass
Orhiscaffold13300032110.1 Phenylpropanoid CSE medium pass
Orhiscaffold13460033660.1 Phenylpropanoid CSE medium pass
Orhiscaffold14110039350.1 Phenylpropanoid CSE low borderline
Orhiscaffold1570051140.1 Phenylpropanoid CSE medium pass
Orhiscaffold160053290.1 Phenylpropanoid CSE medium pass
Orhiscaffold16420056760.1 Phenylpropanoid CSE medium pass
Orhiscaffold16420056770.1 Phenylpropanoid CSE medium pass
Orhiscaffold1670058390.1 Phenylpropanoid CSE medium pass
Orhiscaffold17280062930.1 Phenylpropanoid CSE medium pass
Orhiscaffold17680065150.1 Phenylpropanoid CSE medium pass
Orhiscaffold19750079480.1 Phenylpropanoid CSE medium pass
Orhiscaffold23680105830.1 Phenylpropanoid CSE medium pass
Orhiscaffold25270114970.1 Phenylpropanoid CSE medium pass
Orhiscaffold30010140230.1 Phenylpropanoid CSE medium pass
Orhiscaffold3010140620.1 Phenylpropanoid CSE medium pass
Orhiscaffold330154990.1 Phenylpropanoid CSE medium pass
Orhiscaffold340159580.1 Phenylpropanoid CSE low borderline
Orhiscaffold34660162720.1 Phenylpropanoid CSE medium pass
Orhiscaffold4400200360.1 Phenylpropanoid CSE low borderline
Orhiscaffold44430201980.1 Phenylpropanoid CSE medium pass
Orhiscaffold45980207000.1 Phenylpropanoid CSE low borderline
Orhiscaffold45980207010.1 Phenylpropanoid CSE medium pass
Orhiscaffold47790212910.1 Phenylpropanoid CSE low borderline
Orhiscaffold48110214090.1 Phenylpropanoid CSE medium pass
Orhiscaffold52020227230.1 Phenylpropanoid CSE medium pass
Orhiscaffold5270228750.1 Phenylpropanoid CSE medium pass
Orhiscaffold5270228760.1 Phenylpropanoid CSE medium pass
Orhiscaffold6770268120.1 Phenylpropanoid CSE medium pass
Orhiscaffold6860270610.1 Phenylpropanoid CSE medium pass
Orhiscaffold7020274550.1 Phenylpropanoid CSE medium pass
Orhiscaffold7020274570.1 Phenylpropanoid CSE medium pass
Orhiscaffold73320280420.1 Phenylpropanoid CSE medium pass
Orhiscaffold73320280430.1 Phenylpropanoid CSE medium pass
Orhiscaffold7340280530.1 Phenylpropanoid CSE medium pass
Orhiscaffold7790289330.1 Phenylpropanoid CSE medium pass
Orhiscaffold9340313380.1 Phenylpropanoid CSE medium pass
Orhiscaffold9710318010.1 Phenylpropanoid CSE medium pass