PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1626
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Orhiscaffold36050169180.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold39880184330.1 Steroid DWF4/CYP90B1 medium borderline
Orhiscaffold42210193530.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold4260194720.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold4490203460.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold47450211770.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold4950218150.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold50080220910.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold510223390.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold510223410.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold51250224610.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold51980226730.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold53780231680.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold54410233380.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold55690236650.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold5660239280.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold5660239290.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold58400244140.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold58400244150.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold6020248810.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold6020248830.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold6020248830.3 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold6420259270.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold65400262450.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold66320264290.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold66890265950.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold6720266790.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold67690267920.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold69190272120.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold70310274840.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold70330274880.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold70930276150.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold79480292190.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold8140296340.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold8340299020.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold84570300860.1 Steroid DWF4/CYP90B1 low borderline