PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1626
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Orhiscaffold11190013570.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold1180019200.1 Steroid BR6OX1/CYP85A1 low borderline
Orhiscaffold11810019290.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold119210020160.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold150045850.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold150045860.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold20870087900.1 Steroid BR6OX1/CYP85A1 low borderline
Orhiscaffold20970088370.1 Steroid BR6OX1/CYP85A1 low borderline
Orhiscaffold21450091750.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold23310103460.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold2560116690.1 Steroid BR6OX1/CYP85A1 low borderline
Orhiscaffold3300155270.1 Steroid BR6OX1/CYP85A1 low borderline
Orhiscaffold33550157520.1 Steroid BR6OX1/CYP85A1 low borderline
Orhiscaffold34410161690.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold3760175150.1 Steroid BR6OX1/CYP85A1 low borderline
Orhiscaffold44930203520.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold5040221920.1 Steroid BR6OX1/CYP85A1 low borderline
Orhiscaffold54180232780.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold59270246370.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold600248100.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold6640264470.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold6750267580.1 Steroid BR6OX1/CYP85A1 medium borderline
Orhiscaffold67870268390.1 Steroid BR6OX1/CYP85A1 low borderline
Orhiscaffold1030004000.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold10610007780.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold10630007900.2 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold11250014280.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold1160016920.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold12290023200.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold12450024680.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold12560025520.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold12560025530.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold12620026070.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold12950028650.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold13240031380.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold13500033950.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold13770035910.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold14200040180.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold14510042560.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold14510042570.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold15100046890.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold17380063400.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold17790066060.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold17910066780.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold17980067230.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold18040068120.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold18480070940.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold19210075990.1 Steroid BR6OX2/CYP85A2 medium borderline
Orhiscaffold2050085550.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold210088480.1 Steroid BR6OX2/CYP85A2 low borderline