PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1935
Candidate Protein Records
1626
Pathway-Level Records
4131
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Orhiscaffold3010140620.1 Phenylpropanoid CSE medium pass
Orhiscaffold330154990.1 Phenylpropanoid CSE medium pass
Orhiscaffold340159580.1 Phenylpropanoid CSE low borderline
Orhiscaffold34660162720.1 Phenylpropanoid CSE medium pass
Orhiscaffold4400200360.1 Phenylpropanoid CSE low borderline
Orhiscaffold44430201980.1 Phenylpropanoid CSE medium pass
Orhiscaffold45980207000.1 Phenylpropanoid CSE low borderline
Orhiscaffold45980207010.1 Phenylpropanoid CSE medium pass
Orhiscaffold47790212910.1 Phenylpropanoid CSE low borderline
Orhiscaffold48110214090.1 Phenylpropanoid CSE medium pass
Orhiscaffold52020227230.1 Phenylpropanoid CSE medium pass
Orhiscaffold5270228750.1 Phenylpropanoid CSE medium pass
Orhiscaffold5270228760.1 Phenylpropanoid CSE medium pass
Orhiscaffold6770268120.1 Phenylpropanoid CSE medium pass
Orhiscaffold6860270610.1 Phenylpropanoid CSE medium pass
Orhiscaffold7020274550.1 Phenylpropanoid CSE medium pass
Orhiscaffold7020274570.1 Phenylpropanoid CSE medium pass
Orhiscaffold73320280420.1 Phenylpropanoid CSE medium pass
Orhiscaffold73320280430.1 Phenylpropanoid CSE medium pass
Orhiscaffold7340280530.1 Phenylpropanoid CSE medium pass
Orhiscaffold7790289330.1 Phenylpropanoid CSE medium pass
Orhiscaffold9340313380.1 Phenylpropanoid CSE medium pass
Orhiscaffold9710318010.1 Phenylpropanoid CSE medium pass
Orhiscaffold11810019300.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold12560025530.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold12560025550.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold15570050230.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold16910059980.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold17910066790.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold2630120650.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold27580127680.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold28380131360.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold28890134020.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold3150147960.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold3300155270.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold33330156490.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold33330156500.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold37340174250.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold59760247590.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold6020248810.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold6020248830.3 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold7540284280.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold760285170.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold8100295710.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold83680299430.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold8440300610.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold84570300860.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold91750311110.1 Phenylpropanoid F5H/CYP84A medium borderline
Orhiscaffold11900019980.1 Phenylpropanoid HCT low borderline
Orhiscaffold12710026510.1 Phenylpropanoid HCT low borderline