PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1935
Candidate Protein Records
1626
Pathway-Level Records
4131
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Orhiscaffold8270297860.1 Terpenoid HMGS high pass
Orhiscaffold8620303390.1 Terpenoid HMGS low borderline
Orhiscaffold3250152730.1 Terpenoid IDI medium pass
Orhiscaffold9770318640.1 Terpenoid IDI medium pass
Orhiscaffold15730051350.1 Terpenoid MCT/IspD low borderline
Orhiscaffold38080177220.1 Terpenoid MCT/IspD low borderline
Orhiscaffold970317810.1 Terpenoid MCT/IspD high pass
Orhiscaffold2440109910.1 Terpenoid MDS/IspF high pass
Orhiscaffold330155000.1 Terpenoid MDS/IspF low borderline
Orhiscaffold34930164100.1 Terpenoid MDS/IspF low borderline
Orhiscaffold16840059370.1 Terpenoid MVD low borderline
Orhiscaffold18360070120.1 Terpenoid MVD low borderline
Orhiscaffold41590191120.1 Terpenoid MVD low borderline
Orhiscaffold4770212630.1 Terpenoid MVD medium pass
Orhiscaffold10970011350.1 Terpenoid MVK low borderline
Orhiscaffold18040068120.1 Terpenoid MVK medium pass
Orhiscaffold18040068130.1 Terpenoid MVK medium pass
Orhiscaffold18040068140.1 Terpenoid MVK medium pass
Orhiscaffold2840131460.1 Terpenoid MVK low borderline
Orhiscaffold6580263270.1 Terpenoid MVK low borderline
Orhiscaffold18560071500.1 Terpenoid PMK medium pass
Orhiscaffold40000185220.1 Terpenoid PMK medium pass
Orhiscaffold10090001480.1 Terpenoid TPS medium pass
Orhiscaffold10810009610.1 Terpenoid TPS medium pass
Orhiscaffold10810009630.1 Terpenoid TPS medium pass
Orhiscaffold11320014650.1 Terpenoid TPS medium pass
Orhiscaffold12340023690.1 Terpenoid TPS medium pass
Orhiscaffold12340023690.2 Terpenoid TPS medium pass
Orhiscaffold13320032350.1 Terpenoid TPS medium pass
Orhiscaffold13320032360.1 Terpenoid TPS medium pass
Orhiscaffold14140039500.1 Terpenoid TPS medium pass
Orhiscaffold14910045280.1 Terpenoid TPS medium pass
Orhiscaffold14910045290.1 Terpenoid TPS medium pass
Orhiscaffold14910045300.1 Terpenoid TPS low borderline
Orhiscaffold14910045310.1 Terpenoid TPS medium pass
Orhiscaffold15100046880.1 Terpenoid TPS medium pass
Orhiscaffold15100046900.1 Terpenoid TPS medium pass
Orhiscaffold16190054880.1 Terpenoid TPS medium pass
Orhiscaffold16190054890.1 Terpenoid TPS medium pass
Orhiscaffold16790058910.1 Terpenoid TPS medium pass
Orhiscaffold19290076310.1 Terpenoid TPS medium pass
Orhiscaffold19290076330.1 Terpenoid TPS medium pass
Orhiscaffold22800099910.1 Terpenoid TPS medium pass
Orhiscaffold26280120510.1 Terpenoid TPS medium pass
Orhiscaffold26280120520.1 Terpenoid TPS medium pass
Orhiscaffold26280120530.1 Terpenoid TPS medium pass
Orhiscaffold26950124100.1 Terpenoid TPS medium pass
Orhiscaffold2830131100.1 Terpenoid TPS medium pass
Orhiscaffold30800144260.1 Terpenoid TPS medium pass
Orhiscaffold30800144270.1 Terpenoid TPS medium pass