PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1626
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Orhiscaffold6100250710.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold6140251730.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold62020253670.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold620253400.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold62510255120.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold62830255930.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold63630257980.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold63660258040.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold63660258050.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold66320264300.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold670266220.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold6720266800.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold67690267940.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold70930276140.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold71160276540.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold73240280130.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold7540284280.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold760285180.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold7820290010.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold83680299440.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold83750299580.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold86990304250.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold8730304720.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold90308520.1 Steroid BR6OX2/CYP85A2 low borderline
Orhiscaffold10810009630.1 Steroid CAS low borderline
Orhiscaffold14910045310.1 Steroid CAS medium pass
Orhiscaffold16370056340.1 Steroid CAS medium pass
Orhiscaffold16790058910.1 Steroid CAS medium pass
Orhiscaffold19090075040.1 Steroid CAS medium pass
Orhiscaffold19090075050.1 Steroid CAS medium pass
Orhiscaffold22800099910.1 Steroid CAS medium pass
Orhiscaffold23770106460.1 Steroid CAS medium pass
Orhiscaffold25090113990.1 Steroid CAS medium pass
Orhiscaffold26950124100.1 Steroid CAS low borderline
Orhiscaffold2830131100.1 Steroid CAS low borderline
Orhiscaffold2890134030.1 Steroid CAS medium pass
Orhiscaffold2890134040.1 Steroid CAS medium pass
Orhiscaffold30200141450.1 Steroid CAS medium pass
Orhiscaffold30200141460.1 Steroid CAS medium pass
Orhiscaffold31370147300.1 Steroid CAS low borderline
Orhiscaffold32500152740.1 Steroid CAS medium pass
Orhiscaffold34810163550.1 Steroid CAS medium pass
Orhiscaffold34810163560.1 Steroid CAS medium pass
Orhiscaffold37690175500.1 Steroid CAS low borderline
Orhiscaffold38280178060.1 Steroid CAS medium pass
Orhiscaffold39970184600.1 Steroid CAS medium pass
Orhiscaffold40390186290.1 Steroid CAS low borderline
Orhiscaffold41140189480.1 Steroid CAS low borderline
Orhiscaffold4630208280.1 Steroid CAS medium pass
Orhiscaffold4630208290.1 Steroid CAS medium pass