PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1935
Candidate Protein Records
1626
Pathway-Level Records
4131
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Orhiscaffold86990304250.1 Rosmarinic Acid C4H low borderline
Orhiscaffold8730304720.1 Rosmarinic Acid C4H low borderline
Orhiscaffold87940305450.1 Rosmarinic Acid C4H low borderline
Orhiscaffold9020309250.1 Rosmarinic Acid C4H medium pass
Orhiscaffold90308520.1 Rosmarinic Acid C4H low borderline
Orhiscaffold90740309800.1 Rosmarinic Acid C4H low borderline
Orhiscaffold91060310250.1 Rosmarinic Acid C4H low borderline
Orhiscaffold91750311110.1 Rosmarinic Acid C4H low borderline
Orhiscaffold950315280.1 Rosmarinic Acid C4H low borderline
Orhiscaffold11580016800.1 Rosmarinic Acid CPR low borderline
Orhiscaffold13720035850.1 Rosmarinic Acid CPR medium pass
Orhiscaffold15300048390.1 Rosmarinic Acid CPR low borderline
Orhiscaffold19320076690.1 Rosmarinic Acid CPR medium pass
Orhiscaffold19320076710.1 Rosmarinic Acid CPR medium pass
Orhiscaffold21400091460.1 Rosmarinic Acid CPR medium pass
Orhiscaffold22070095690.1 Rosmarinic Acid CPR low borderline
Orhiscaffold23530104810.1 Rosmarinic Acid CPR low borderline
Orhiscaffold32320151870.1 Rosmarinic Acid CPR low borderline
Orhiscaffold56970240230.1 Rosmarinic Acid CPR low borderline
Orhiscaffold57140240730.1 Rosmarinic Acid CPR medium pass
Orhiscaffold5750241610.1 Rosmarinic Acid CPR medium pass
Orhiscaffold8000293790.1 Rosmarinic Acid CPR low borderline
Orhiscaffold10070001200.1 Rosmarinic Acid HPPR low borderline
Orhiscaffold1160016980.1 Rosmarinic Acid HPPR medium pass
Orhiscaffold14020038660.1 Rosmarinic Acid HPPR low borderline
Orhiscaffold14020038670.1 Rosmarinic Acid HPPR medium pass
Orhiscaffold9930320260.1 Rosmarinic Acid HPPR medium pass
Orhiscaffold9930320270.1 Rosmarinic Acid HPPR medium pass
Orhiscaffold9930320290.1 Rosmarinic Acid HPPR medium pass
Orhiscaffold13430033510.1 Rosmarinic Acid PAL high pass
Orhiscaffold14310041220.1 Rosmarinic Acid PAL high pass
Orhiscaffold37640175390.1 Rosmarinic Acid PAL high pass
Orhiscaffold4970218700.1 Rosmarinic Acid PAL high pass
Orhiscaffold64340259670.1 Rosmarinic Acid PAL high pass
Orhiscaffold8370299520.1 Rosmarinic Acid PAL high pass
Orhiscaffold93690313700.1 Rosmarinic Acid PAL high pass
Orhiscaffold10090001390.1 Rosmarinic Acid RAS low borderline
Orhiscaffold11070012410.1 Rosmarinic Acid RAS medium pass
Orhiscaffold1160017050.1 Rosmarinic Acid RAS low borderline
Orhiscaffold11930020260.1 Rosmarinic Acid RAS low borderline
Orhiscaffold13010029270.1 Rosmarinic Acid RAS low borderline
Orhiscaffold13450033600.1 Rosmarinic Acid RAS low borderline
Orhiscaffold14410041890.1 Rosmarinic Acid RAS medium pass
Orhiscaffold14730043950.1 Rosmarinic Acid RAS medium pass
Orhiscaffold14730043960.1 Rosmarinic Acid RAS medium pass
Orhiscaffold14730043980.1 Rosmarinic Acid RAS medium pass
Orhiscaffold15740051470.1 Rosmarinic Acid RAS medium pass
Orhiscaffold1630055940.1 Rosmarinic Acid RAS low borderline
Orhiscaffold16780058880.1 Rosmarinic Acid RAS low borderline
Orhiscaffold18500071110.1 Rosmarinic Acid RAS low borderline