PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1626
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Orhiscaffold10910010860.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold11360015000.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold12270022980.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold12450024660.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold12560025550.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold13030029480.1 Steroid DWF4/CYP90B1 medium borderline
Orhiscaffold14120039360.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold14200040190.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold14740044020.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold150045840.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold1540048950.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold15530050060.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold16020053630.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold16020053640.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold16020053650.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold16020053660.2 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold16020053670.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold1680059030.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold1730063010.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold17450063800.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold17790066050.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold17910066790.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold18480070930.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold18480070950.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold18480070960.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold19040074730.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold20081610.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold20081610.2 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold20650086580.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold20650086600.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold20760087060.1 Steroid DWF4/CYP90B1 medium borderline
Orhiscaffold21260090300.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold22350097430.1 Steroid DWF4/CYP90B1 medium borderline
Orhiscaffold22390097540.1 Steroid DWF4/CYP90B1 medium borderline
Orhiscaffold23510104740.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold25470116000.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold26330120990.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold27700128290.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold28380131360.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold29090134980.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold29230135670.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold30190141280.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold30360142030.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold3050142740.1 Steroid DWF4/CYP90B1 medium borderline
Orhiscaffold3050142750.1 Steroid DWF4/CYP90B1 medium borderline
Orhiscaffold3390159140.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold34640162650.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold36050169170.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold36050169180.1 Steroid DWF4/CYP90B1 low borderline
Orhiscaffold39880184330.1 Steroid DWF4/CYP90B1 medium borderline