PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
OsatMH6301G0048170.1 Flavonoid C4H medium borderline
OsatMH6301G0057800.1 Flavonoid C4H medium borderline
OsatMH6301G0057810.1 Flavonoid C4H medium pass
OsatMH6305G0022020.1 Flavonoid C4H medium borderline
OsatMH6306G0011780.1 Flavonoid C4H low borderline
OsatMH6307G0044490.1 Flavonoid C4H medium borderline
OsatMH6308G0024220.1 Flavonoid C4H low borderline
OsatMH6308G0024220.2 Flavonoid C4H low borderline
OsatMH6311G0013780.1 Flavonoid C4H low borderline
OsatMH6301G0007620.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0008660.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0008660.2 Rosmarinic Acid C4H low borderline
OsatMH6301G0009900.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0009910.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0009920.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0009930.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0011480.1 Rosmarinic Acid C4H medium pass
OsatMH6301G0011510.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0011520.1 Rosmarinic Acid C4H medium pass
OsatMH6301G0011520.2 Rosmarinic Acid C4H low borderline
OsatMH6301G0011520.3 Rosmarinic Acid C4H low borderline
OsatMH6301G0023700.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0026330.1 Rosmarinic Acid C4H medium pass
OsatMH6301G0027530.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0034280.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0034290.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0036060.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0039610.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0039620.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0042090.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0042100.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0042100.2 Rosmarinic Acid C4H low borderline
OsatMH6301G0042100.3 Rosmarinic Acid C4H low borderline
OsatMH6301G0042100.5 Rosmarinic Acid C4H low borderline
OsatMH6301G0042100.6 Rosmarinic Acid C4H low borderline
OsatMH6301G0042100.7 Rosmarinic Acid C4H low borderline
OsatMH6301G0042120.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0042140.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0048150.1 Rosmarinic Acid C4H medium pass
OsatMH6301G0048170.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0057800.1 Rosmarinic Acid C4H medium pass
OsatMH6301G0057810.1 Rosmarinic Acid C4H medium pass
OsatMH6301G0069180.1 Rosmarinic Acid C4H low borderline
OsatMH6301G0069190.1 Rosmarinic Acid C4H low borderline
OsatMH6302G0000840.1 Rosmarinic Acid C4H low borderline
OsatMH6302G0006870.1 Rosmarinic Acid C4H low borderline
OsatMH6302G0006870.2 Rosmarinic Acid C4H low borderline
OsatMH6302G0008020.1 Rosmarinic Acid C4H medium pass
OsatMH6302G0008050.1 Rosmarinic Acid C4H low borderline
OsatMH6302G0008090.1 Rosmarinic Acid C4H medium pass