PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
OsatMH6301G0052460.1 Alkaloid GS low borderline
OsatMH6302G0008280.1 Alkaloid GS high pass
OsatMH6302G0008280.2 Alkaloid GS medium pass
OsatMH6302G0035400.1 Alkaloid GS low borderline
OsatMH6303G0000210.5 Alkaloid GS low borderline
OsatMH6304G0000560.1 Alkaloid GS low borderline
OsatMH6304G0013160.1 Alkaloid GS high pass
OsatMH6304G0027050.1 Alkaloid GS low borderline
OsatMH6304G0027050.2 Alkaloid GS low borderline
OsatMH6304G0027050.3 Alkaloid GS low borderline
OsatMH6304G0027050.4 Alkaloid GS low borderline
OsatMH6304G0027160.1 Alkaloid GS low borderline
OsatMH6304G0027200.1 Alkaloid GS low borderline
OsatMH6304G0029210.1 Alkaloid GS low borderline
OsatMH6304G0048940.1 Alkaloid GS high pass
OsatMH6305G0021090.1 Alkaloid GS low borderline
OsatMH6306G0025560.1 Alkaloid GS medium pass
OsatMH6306G0025560.2 Alkaloid GS medium pass
OsatMH6306G0025560.3 Alkaloid GS medium pass
OsatMH6308G0000750.1 Alkaloid GS medium pass
OsatMH6308G0000750.2 Alkaloid GS medium pass
OsatMH6308G0000750.3 Alkaloid GS medium pass
OsatMH6308G0015710.1 Alkaloid GS high pass
OsatMH6308G0028060.1 Alkaloid GS low borderline
OsatMH6308G0043390.1 Alkaloid GS medium pass
OsatMH6309G0023890.1 Alkaloid GS high pass
OsatMH6309G0023900.1 Alkaloid GS high pass
OsatMH6309G0023910.1 Alkaloid GS medium pass
OsatMH6309G0032590.1 Alkaloid GS low borderline
OsatMH6309G0032630.1 Alkaloid GS low borderline
OsatMH6309G0032640.1 Alkaloid GS low borderline
OsatMH6310G0010900.1 Alkaloid GS high pass
OsatMH6310G0010900.2 Alkaloid GS high pass
OsatMH6310G0010900.3 Alkaloid GS high pass
OsatMH6310G0010900.4 Alkaloid GS high pass
OsatMH6310G0010900.5 Alkaloid GS high pass
OsatMH6310G0010900.6 Alkaloid GS high pass
OsatMH6310G0010900.7 Alkaloid GS high pass
OsatMH6310G0025660.1 Alkaloid GS high pass
OsatMH6310G0025660.2 Alkaloid GS high pass
OsatMH6310G0025660.3 Alkaloid GS high pass
OsatMH6310G0036390.2 Alkaloid GS low borderline
OsatMH6311G0001020.1 Alkaloid GS low borderline
OsatMH6311G0036520.1 Alkaloid GS high pass