PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status
OsatMH6301G0026150.1 Phenylpropanoid LAC medium pass
OsatMH6301G0042750.1 Phenylpropanoid LAC medium pass
OsatMH6301G0057480.1 Phenylpropanoid LAC low borderline
OsatMH6301G0058510.1 Phenylpropanoid LAC medium pass
OsatMH6301G0059790.1 Phenylpropanoid LAC medium pass
OsatMH6301G0059800.1 Phenylpropanoid LAC medium pass
OsatMH6301G0059890.1 Phenylpropanoid LAC medium pass
OsatMH6301G0060400.1 Phenylpropanoid LAC medium pass
OsatMH6301G0060400.2 Phenylpropanoid LAC medium pass
OsatMH6301G0060400.3 Phenylpropanoid LAC medium pass
OsatMH6301G0060410.1 Phenylpropanoid LAC low borderline
OsatMH6302G0051480.1 Phenylpropanoid LAC medium pass
OsatMH6302G0051480.2 Phenylpropanoid LAC medium pass
OsatMH6303G0015670.1 Phenylpropanoid LAC medium pass
OsatMH6303G0017680.1 Phenylpropanoid LAC medium pass
OsatMH6303G0017680.2 Phenylpropanoid LAC medium pass
OsatMH6303G0017680.3 Phenylpropanoid LAC medium pass
OsatMH6304G0044190.1 Phenylpropanoid LAC low borderline
OsatMH6304G0044190.2 Phenylpropanoid LAC low borderline
OsatMH6305G0034810.1 Phenylpropanoid LAC medium pass
OsatMH6305G0034830.1 Phenylpropanoid LAC low borderline
OsatMH6305G0034850.1 Phenylpropanoid LAC medium pass
OsatMH6306G0000330.1 Phenylpropanoid LAC low borderline
OsatMH6306G0000330.2 Phenylpropanoid LAC low borderline
OsatMH6306G0034460.1 Phenylpropanoid LAC medium pass
OsatMH6306G0034480.1 Phenylpropanoid LAC medium pass
OsatMH6306G0034480.2 Phenylpropanoid LAC medium pass
OsatMH6307G0000090.1 Phenylpropanoid LAC medium pass
OsatMH6307G0001770.1 Phenylpropanoid LAC low borderline
OsatMH6308G0004830.1 Phenylpropanoid LAC low borderline
OsatMH6309G0020800.1 Phenylpropanoid LAC medium pass
OsatMH6309G0032910.1 Phenylpropanoid LAC medium pass
OsatMH6310G0018310.1 Phenylpropanoid LAC medium pass
OsatMH6310G0025910.1 Phenylpropanoid LAC low borderline
OsatMH6310G0026120.1 Phenylpropanoid LAC medium pass
OsatMH6310G0026130.1 Phenylpropanoid LAC medium pass
OsatMH6311G0000770.1 Phenylpropanoid LAC medium pass
OsatMH6311G0013540.1 Phenylpropanoid LAC medium pass
OsatMH6311G0038220.1 Phenylpropanoid LAC medium pass
OsatMH6311G0038240.1 Phenylpropanoid LAC medium pass
OsatMH6311G0038240.2 Phenylpropanoid LAC medium pass
OsatMH6311G0038240.3 Phenylpropanoid LAC medium pass
OsatMH6311G0044590.1 Phenylpropanoid LAC medium pass
OsatMH6311G0045510.1 Phenylpropanoid LAC medium pass
OsatMH6311G0045510.2 Phenylpropanoid LAC medium pass
OsatMH6311G0045510.3 Phenylpropanoid LAC medium pass
OsatMH6311G0045510.4 Phenylpropanoid LAC medium pass
OsatMH6312G0000660.1 Phenylpropanoid LAC medium pass
OsatMH6312G0012410.1 Phenylpropanoid LAC medium pass
OsatMH6312G0012490.1 Phenylpropanoid LAC medium pass