PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
OsatMH6301G0007620.1 Alkaloid T3O medium pass
OsatMH6301G0008660.1 Alkaloid T3O medium pass
OsatMH6301G0008660.2 Alkaloid T3O medium pass
OsatMH6301G0009900.1 Alkaloid T3O low borderline
OsatMH6301G0009910.1 Alkaloid T3O medium pass
OsatMH6301G0009920.1 Alkaloid T3O medium pass
OsatMH6301G0009930.1 Alkaloid T3O medium pass
OsatMH6301G0026330.1 Alkaloid T3O medium borderline
OsatMH6301G0048150.1 Alkaloid T3O medium borderline
OsatMH6301G0056180.1 Alkaloid T3O low borderline
OsatMH6301G0056190.1 Alkaloid T3O medium pass
OsatMH6301G0056200.1 Alkaloid T3O low borderline
OsatMH6301G0056290.1 Alkaloid T3O low borderline
OsatMH6301G0056290.2 Alkaloid T3O low borderline
OsatMH6301G0056310.1 Alkaloid T3O low borderline
OsatMH6301G0056330.1 Alkaloid T3O medium pass
OsatMH6301G0056340.1 Alkaloid T3O medium pass
OsatMH6301G0060760.1 Alkaloid T3O low borderline
OsatMH6301G0061040.1 Alkaloid T3O medium pass
OsatMH6301G0061040.2 Alkaloid T3O medium pass
OsatMH6301G0068540.1 Alkaloid T3O low borderline
OsatMH6301G0068550.1 Alkaloid T3O low borderline
OsatMH6301G0069180.1 Alkaloid T3O medium borderline
OsatMH6301G0069190.1 Alkaloid T3O medium borderline
OsatMH6302G0000950.1 Alkaloid T3O low borderline
OsatMH6302G0008020.1 Alkaloid T3O medium borderline
OsatMH6302G0008050.1 Alkaloid T3O medium borderline
OsatMH6302G0008090.1 Alkaloid T3O medium borderline
OsatMH6302G0008200.1 Alkaloid T3O medium borderline
OsatMH6302G0008210.1 Alkaloid T3O medium borderline
OsatMH6302G0008220.1 Alkaloid T3O medium borderline
OsatMH6302G0011060.1 Alkaloid T3O medium borderline
OsatMH6302G0029280.1 Alkaloid T3O medium borderline
OsatMH6302G0029560.1 Alkaloid T3O medium borderline
OsatMH6302G0029560.2 Alkaloid T3O medium borderline
OsatMH6302G0029560.3 Alkaloid T3O medium borderline
OsatMH6302G0029810.1 Alkaloid T3O medium pass
OsatMH6302G0029810.2 Alkaloid T3O medium pass
OsatMH6302G0029810.3 Alkaloid T3O medium pass
OsatMH6302G0029830.1 Alkaloid T3O medium borderline
OsatMH6302G0029850.1 Alkaloid T3O medium borderline
OsatMH6302G0032210.1 Alkaloid T3O medium borderline
OsatMH6302G0035630.1 Alkaloid T3O medium borderline
OsatMH6302G0035690.1 Alkaloid T3O medium borderline
OsatMH6302G0035770.1 Alkaloid T3O medium borderline
OsatMH6302G0035790.1 Alkaloid T3O medium borderline
OsatMH6302G0035910.1 Alkaloid T3O medium borderline
OsatMH6302G0037890.1 Alkaloid T3O medium pass
OsatMH6302G0037890.2 Alkaloid T3O medium pass
OsatMH6302G0038430.1 Alkaloid T3O medium borderline