PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status
OsatMH6301G0015620.1 Flavonoid CHS low borderline
OsatMH6301G0039630.1 Flavonoid CHS medium pass
OsatMH6301G0039630.2 Flavonoid CHS medium pass
OsatMH6303G0045980.1 Flavonoid CHS medium pass
OsatMH6304G0000400.1 Flavonoid CHS medium pass
OsatMH6304G0000400.2 Flavonoid CHS medium pass
OsatMH6304G0022410.1 Flavonoid CHS medium pass
OsatMH6305G0010410.1 Flavonoid CHS low borderline
OsatMH6305G0010410.2 Flavonoid CHS low borderline
OsatMH6305G0010410.3 Flavonoid CHS low borderline
OsatMH6305G0010410.4 Flavonoid CHS low borderline
OsatMH6305G0010420.1 Flavonoid CHS medium pass
OsatMH6305G0024040.1 Flavonoid CHS low borderline
OsatMH6307G0010680.1 Flavonoid CHS medium pass
OsatMH6307G0017940.1 Flavonoid CHS medium pass
OsatMH6307G0022530.1 Flavonoid CHS medium pass
OsatMH6307G0031380.1 Flavonoid CHS medium pass
OsatMH6307G0031380.2 Flavonoid CHS medium pass
OsatMH6307G0031390.1 Flavonoid CHS medium pass
OsatMH6307G0033400.1 Flavonoid CHS medium pass
OsatMH6307G0033450.1 Flavonoid CHS medium pass
OsatMH6307G0033510.1 Flavonoid CHS medium pass
OsatMH6309G0001610.1 Flavonoid CHS low borderline
OsatMH6310G0006300.1 Flavonoid CHS medium pass
OsatMH6310G0007370.1 Flavonoid CHS medium pass
OsatMH6310G0007390.1 Flavonoid CHS medium pass
OsatMH6310G0008180.1 Flavonoid CHS medium pass
OsatMH6310G0008230.1 Flavonoid CHS medium pass
OsatMH6310G0008240.1 Flavonoid CHS medium pass
OsatMH6310G0009130.1 Flavonoid CHS medium pass
OsatMH6310G0009150.1 Flavonoid CHS medium pass
OsatMH6310G0030230.1 Flavonoid CHS medium pass
OsatMH6311G0030240.1 Flavonoid CHS medium pass
OsatMH6311G0030270.1 Flavonoid CHS medium pass
OsatMH6311G0030290.1 Flavonoid CHS medium pass
OsatMH6311G0030300.1 Flavonoid CHS medium pass
OsatMH6311G0030320.1 Flavonoid CHS medium pass
OsatMH6311G0030320.2 Flavonoid CHS medium pass
OsatMH6311G0033060.1 Flavonoid CHS medium pass