PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
OsatMH6301G0006050.3 Alkaloid SLS low borderline
OsatMH6301G0023610.1 Alkaloid SLS medium borderline
OsatMH6301G0027530.1 Alkaloid SLS medium borderline
OsatMH6301G0039610.1 Alkaloid SLS medium borderline
OsatMH6301G0039620.1 Alkaloid SLS medium borderline
OsatMH6301G0042090.1 Alkaloid SLS medium borderline
OsatMH6301G0042100.1 Alkaloid SLS medium borderline
OsatMH6301G0042100.2 Alkaloid SLS medium borderline
OsatMH6301G0042100.3 Alkaloid SLS medium borderline
OsatMH6301G0042100.5 Alkaloid SLS medium borderline
OsatMH6301G0042100.6 Alkaloid SLS medium borderline
OsatMH6301G0042100.7 Alkaloid SLS medium borderline
OsatMH6301G0050460.1 Alkaloid SLS medium borderline
OsatMH6302G0006870.1 Alkaloid SLS medium borderline
OsatMH6302G0006870.2 Alkaloid SLS medium borderline
OsatMH6302G0009860.1 Alkaloid SLS medium borderline
OsatMH6302G0009860.2 Alkaloid SLS medium borderline
OsatMH6302G0057740.1 Alkaloid SLS medium borderline
OsatMH6303G0024270.1 Alkaloid SLS medium borderline
OsatMH6303G0024330.1 Alkaloid SLS medium borderline
OsatMH6303G0024330.2 Alkaloid SLS medium borderline
OsatMH6304G0045250.1 Alkaloid SLS medium borderline
OsatMH6305G0024540.1 Alkaloid SLS low borderline
OsatMH6305G0030360.1 Alkaloid SLS medium borderline
OsatMH6305G0030380.1 Alkaloid SLS medium borderline
OsatMH6305G0036700.1 Alkaloid SLS medium borderline
OsatMH6306G0002510.1 Alkaloid SLS medium borderline
OsatMH6306G0007790.1 Alkaloid SLS medium borderline
OsatMH6306G0007800.1 Alkaloid SLS medium borderline
OsatMH6306G0037520.1 Alkaloid SLS medium borderline
OsatMH6307G0023170.1 Alkaloid SLS medium borderline
OsatMH6307G0023290.1 Alkaloid SLS medium borderline
OsatMH6307G0043300.1 Alkaloid SLS medium borderline
OsatMH6307G0044490.1 Alkaloid SLS medium borderline
OsatMH6308G0033070.1 Alkaloid SLS medium borderline
OsatMH6309G0024200.1 Alkaloid SLS medium borderline
OsatMH6309G0024200.2 Alkaloid SLS medium borderline
OsatMH6310G0035270.1 Alkaloid SLS medium borderline
OsatMH6310G0035270.2 Alkaloid SLS medium borderline
OsatMH6311G0005250.1 Alkaloid SLS medium borderline
OsatMH6312G0021070.1 Alkaloid SLS medium borderline