PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
OsatMH6301G0000470.1 Alkaloid PMT low borderline
OsatMH6301G0000490.1 Alkaloid PMT low borderline
OsatMH6301G0007210.1 Alkaloid PMT medium pass
OsatMH6301G0007770.1 Alkaloid PMT medium pass
OsatMH6301G0017610.1 Alkaloid PMT medium pass
OsatMH6301G0023620.1 Alkaloid PMT medium pass
OsatMH6301G0041020.1 Alkaloid PMT medium pass
OsatMH6301G0041030.1 Alkaloid PMT medium pass
OsatMH6301G0066630.1 Alkaloid PMT low borderline
OsatMH6302G0012900.1 Alkaloid PMT medium pass
OsatMH6302G0012900.2 Alkaloid PMT medium pass
OsatMH6302G0012900.3 Alkaloid PMT medium pass
OsatMH6302G0014300.1 Alkaloid PMT medium borderline
OsatMH6303G0047890.1 Alkaloid PMT low borderline
OsatMH6304G0007450.1 Alkaloid PMT medium pass
OsatMH6304G0007620.1 Alkaloid PMT medium pass
OsatMH6305G0003280.1 Alkaloid PMT medium pass
OsatMH6305G0007150.1 Alkaloid PMT medium pass
OsatMH6305G0017300.1 Alkaloid PMT medium pass
OsatMH6306G0007310.1 Alkaloid PMT low borderline
OsatMH6306G0007330.1 Alkaloid PMT low borderline
OsatMH6306G0007350.1 Alkaloid PMT low borderline
OsatMH6306G0037050.1 Alkaloid PMT medium pass
OsatMH6306G0037130.1 Alkaloid PMT medium pass
OsatMH6306G0046180.1 Alkaloid PMT medium pass
OsatMH6306G0047260.1 Alkaloid PMT medium pass
OsatMH6307G0006960.1 Alkaloid PMT low borderline
OsatMH6307G0006960.2 Alkaloid PMT low borderline
OsatMH6307G0022190.1 Alkaloid PMT medium borderline
OsatMH6307G0022190.2 Alkaloid PMT medium borderline
OsatMH6308G0040540.1 Alkaloid PMT low borderline
OsatMH6308G0043250.1 Alkaloid PMT low borderline
OsatMH6308G0043250.2 Alkaloid PMT low borderline
OsatMH6308G0043250.3 Alkaloid PMT low borderline
OsatMH6308G0043250.5 Alkaloid PMT low borderline
OsatMH6308G0045200.1 Alkaloid PMT low borderline
OsatMH6309G0025570.1 Alkaloid PMT medium pass
OsatMH6310G0000940.1 Alkaloid PMT low borderline
OsatMH6310G0000960.1 Alkaloid PMT medium borderline
OsatMH6310G0001060.1 Alkaloid PMT medium pass
OsatMH6310G0001110.1 Alkaloid PMT medium pass
OsatMH6310G0001220.1 Alkaloid PMT medium pass
OsatMH6310G0002740.1 Alkaloid PMT medium pass
OsatMH6310G0002810.1 Alkaloid PMT medium pass
OsatMH6310G0031880.1 Alkaloid PMT medium pass
OsatMH6311G0006810.1 Alkaloid PMT medium pass
OsatMH6311G0006950.1 Alkaloid PMT medium pass