PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
OsatMH6301G0022290.1 Phenylpropanoid 4CL medium pass
OsatMH6301G0042870.1 Phenylpropanoid 4CL low borderline
OsatMH6301G0053260.1 Phenylpropanoid 4CL low borderline
OsatMH6301G0053260.2 Phenylpropanoid 4CL low borderline
OsatMH6301G0064620.1 Phenylpropanoid 4CL medium pass
OsatMH6301G0064620.2 Phenylpropanoid 4CL medium pass
OsatMH6301G0064620.3 Phenylpropanoid 4CL medium pass
OsatMH6301G0064660.1 Phenylpropanoid 4CL medium pass
OsatMH6301G0064660.2 Phenylpropanoid 4CL medium pass
OsatMH6301G0064660.3 Phenylpropanoid 4CL medium pass
OsatMH6302G0001640.1 Phenylpropanoid 4CL medium pass
OsatMH6302G0007310.1 Phenylpropanoid 4CL medium pass
OsatMH6302G0007310.2 Phenylpropanoid 4CL medium pass
OsatMH6302G0007310.3 Phenylpropanoid 4CL medium pass
OsatMH6302G0031890.1 Phenylpropanoid 4CL low borderline
OsatMH6302G0031890.2 Phenylpropanoid 4CL low borderline
OsatMH6302G0046620.1 Phenylpropanoid 4CL medium pass
OsatMH6302G0057620.1 Phenylpropanoid 4CL low borderline
OsatMH6303G0002680.1 Phenylpropanoid 4CL medium pass
OsatMH6303G0002860.1 Phenylpropanoid 4CL medium pass
OsatMH6303G0002960.2 Phenylpropanoid 4CL low borderline
OsatMH6303G0002960.3 Phenylpropanoid 4CL low borderline
OsatMH6303G0004650.1 Phenylpropanoid 4CL medium pass
OsatMH6303G0018170.1 Phenylpropanoid 4CL low borderline
OsatMH6303G0060810.1 Phenylpropanoid 4CL low borderline
OsatMH6303G0060810.2 Phenylpropanoid 4CL low borderline
OsatMH6303G0060810.3 Phenylpropanoid 4CL low borderline
OsatMH6303G0060810.4 Phenylpropanoid 4CL low borderline
OsatMH6304G0022800.1 Phenylpropanoid 4CL medium pass
OsatMH6304G0022800.2 Phenylpropanoid 4CL medium pass
OsatMH6304G0031600.1 Phenylpropanoid 4CL low borderline
OsatMH6304G0031600.2 Phenylpropanoid 4CL low borderline
OsatMH6304G0050090.1 Phenylpropanoid 4CL low borderline
OsatMH6304G0054340.1 Phenylpropanoid 4CL medium pass
OsatMH6304G0054340.2 Phenylpropanoid 4CL medium pass
OsatMH6304G0055220.1 Phenylpropanoid 4CL medium pass
OsatMH6305G0002940.1 Phenylpropanoid 4CL low borderline
OsatMH6305G0021600.1 Phenylpropanoid 4CL low borderline
OsatMH6305G0021600.2 Phenylpropanoid 4CL low borderline
OsatMH6305G0021600.3 Phenylpropanoid 4CL low borderline
OsatMH6305G0021600.4 Phenylpropanoid 4CL low borderline
OsatMH6306G0005040.1 Phenylpropanoid 4CL low borderline
OsatMH6306G0005040.2 Phenylpropanoid 4CL low borderline
OsatMH6306G0005040.3 Phenylpropanoid 4CL low borderline
OsatMH6306G0042180.1 Phenylpropanoid 4CL medium pass
OsatMH6306G0042890.1 Phenylpropanoid 4CL low borderline
OsatMH6307G0018770.1 Phenylpropanoid 4CL medium pass
OsatMH6307G0043750.1 Phenylpropanoid 4CL medium pass
OsatMH6308G0002560.1 Phenylpropanoid 4CL low borderline
OsatMH6308G0002560.2 Phenylpropanoid 4CL low borderline