PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
OsatMH6303G0038200.1 Rosmarinic Acid C4H low borderline
OsatMH6303G0038280.1 Rosmarinic Acid C4H low borderline
OsatMH6303G0038350.1 Rosmarinic Acid C4H medium pass
OsatMH6303G0038440.1 Rosmarinic Acid C4H medium pass
OsatMH6303G0039390.1 Rosmarinic Acid C4H low borderline
OsatMH6303G0039390.2 Rosmarinic Acid C4H low borderline
OsatMH6303G0041580.1 Rosmarinic Acid C4H low borderline
OsatMH6303G0043830.1 Rosmarinic Acid C4H medium pass
OsatMH6303G0052030.1 Rosmarinic Acid C4H low borderline
OsatMH6303G0053670.1 Rosmarinic Acid C4H low borderline
OsatMH6303G0053680.1 Rosmarinic Acid C4H medium pass
OsatMH6303G0059950.1 Rosmarinic Acid C4H low borderline
OsatMH6303G0059950.2 Rosmarinic Acid C4H low borderline
OsatMH6303G0061220.1 Rosmarinic Acid C4H medium pass
OsatMH6304G0000180.1 Rosmarinic Acid C4H medium pass
OsatMH6304G0002880.1 Rosmarinic Acid C4H low borderline
OsatMH6304G0002910.1 Rosmarinic Acid C4H low borderline
OsatMH6304G0007430.1 Rosmarinic Acid C4H low borderline
OsatMH6304G0007480.1 Rosmarinic Acid C4H low borderline
OsatMH6304G0007890.1 Rosmarinic Acid C4H low borderline
OsatMH6304G0008090.1 Rosmarinic Acid C4H low borderline
OsatMH6304G0025270.1 Rosmarinic Acid C4H medium pass
OsatMH6304G0031840.1 Rosmarinic Acid C4H low borderline
OsatMH6304G0036550.1 Rosmarinic Acid C4H low borderline
OsatMH6304G0037430.1 Rosmarinic Acid C4H low borderline
OsatMH6304G0037430.2 Rosmarinic Acid C4H low borderline
OsatMH6304G0037440.1 Rosmarinic Acid C4H low borderline
OsatMH6304G0042590.1 Rosmarinic Acid C4H low borderline
OsatMH6304G0045250.1 Rosmarinic Acid C4H low borderline
OsatMH6304G0045250.2 Rosmarinic Acid C4H low borderline
OsatMH6305G0000120.2 Rosmarinic Acid C4H low borderline
OsatMH6305G0000120.3 Rosmarinic Acid C4H low borderline
OsatMH6305G0000120.4 Rosmarinic Acid C4H low borderline
OsatMH6305G0007380.1 Rosmarinic Acid C4H low borderline
OsatMH6305G0009380.1 Rosmarinic Acid C4H low borderline
OsatMH6305G0009380.2 Rosmarinic Acid C4H low borderline
OsatMH6305G0009380.3 Rosmarinic Acid C4H low borderline
OsatMH6305G0022020.1 Rosmarinic Acid C4H medium pass
OsatMH6305G0025990.1 Rosmarinic Acid C4H medium pass
OsatMH6305G0027450.1 Rosmarinic Acid C4H low borderline
OsatMH6305G0030380.1 Rosmarinic Acid C4H low borderline
OsatMH6305G0031110.1 Rosmarinic Acid C4H low borderline
OsatMH6305G0031110.2 Rosmarinic Acid C4H low borderline
OsatMH6305G0031840.1 Rosmarinic Acid C4H medium pass
OsatMH6305G0036700.1 Rosmarinic Acid C4H low borderline
OsatMH6305G0037590.1 Rosmarinic Acid C4H medium pass
OsatMH6305G0039550.1 Rosmarinic Acid C4H low borderline
OsatMH6306G0000160.1 Rosmarinic Acid C4H low borderline
OsatMH6306G0000160.2 Rosmarinic Acid C4H low borderline
OsatMH6306G0000800.1 Rosmarinic Acid C4H low borderline