PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
OsatMH6302G0057200.10 Alkaloid T3O medium pass
OsatMH6302G0057200.11 Alkaloid T3O medium pass
OsatMH6302G0057200.12 Alkaloid T3O medium pass
OsatMH6302G0057200.13 Alkaloid T3O medium pass
OsatMH6303G0001150.1 Alkaloid T3O medium borderline
OsatMH6303G0003370.1 Alkaloid T3O medium pass
OsatMH6303G0003470.1 Alkaloid T3O medium pass
OsatMH6303G0003480.1 Alkaloid T3O low borderline
OsatMH6303G0003500.1 Alkaloid T3O low borderline
OsatMH6303G0003520.1 Alkaloid T3O low borderline
OsatMH6303G0003530.1 Alkaloid T3O medium pass
OsatMH6303G0003530.2 Alkaloid T3O medium pass
OsatMH6303G0005890.1 Alkaloid T3O low borderline
OsatMH6303G0010750.1 Alkaloid T3O low borderline
OsatMH6303G0011170.1 Alkaloid T3O medium pass
OsatMH6303G0013080.1 Alkaloid T3O medium borderline
OsatMH6303G0013080.2 Alkaloid T3O medium borderline
OsatMH6303G0020180.1 Alkaloid T3O medium pass
OsatMH6303G0020180.2 Alkaloid T3O medium pass
OsatMH6303G0031890.1 Alkaloid T3O medium borderline
OsatMH6303G0038280.1 Alkaloid T3O medium borderline
OsatMH6303G0038350.1 Alkaloid T3O medium borderline
OsatMH6303G0038440.1 Alkaloid T3O medium borderline
OsatMH6303G0039370.1 Alkaloid T3O medium pass
OsatMH6303G0039370.3 Alkaloid T3O medium pass
OsatMH6303G0041580.1 Alkaloid T3O low borderline
OsatMH6303G0043830.1 Alkaloid T3O medium borderline
OsatMH6303G0044640.1 Alkaloid T3O low borderline
OsatMH6303G0044730.1 Alkaloid T3O medium pass
OsatMH6303G0044730.2 Alkaloid T3O medium pass
OsatMH6303G0044730.3 Alkaloid T3O low borderline
OsatMH6303G0053680.1 Alkaloid T3O medium borderline
OsatMH6303G0054210.1 Alkaloid T3O low borderline
OsatMH6303G0059950.1 Alkaloid T3O medium pass
OsatMH6303G0059950.2 Alkaloid T3O medium pass
OsatMH6303G0059950.3 Alkaloid T3O medium pass
OsatMH6303G0061220.1 Alkaloid T3O medium borderline
OsatMH6304G0000180.1 Alkaloid T3O medium borderline
OsatMH6304G0007890.1 Alkaloid T3O medium borderline
OsatMH6304G0008090.1 Alkaloid T3O medium borderline
OsatMH6304G0025270.1 Alkaloid T3O medium borderline
OsatMH6304G0031840.1 Alkaloid T3O medium pass
OsatMH6304G0037430.1 Alkaloid T3O medium borderline
OsatMH6304G0044050.1 Alkaloid T3O low borderline
OsatMH6304G0044950.1 Alkaloid T3O medium pass
OsatMH6304G0044950.3 Alkaloid T3O medium pass
OsatMH6305G0000120.3 Alkaloid T3O medium pass
OsatMH6305G0000120.4 Alkaloid T3O medium pass
OsatMH6305G0007380.1 Alkaloid T3O medium pass
OsatMH6305G0009380.1 Alkaloid T3O medium pass