PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
OsatMH6305G0009380.2 Alkaloid T3O medium pass
OsatMH6305G0009380.3 Alkaloid T3O medium pass
OsatMH6305G0010260.1 Alkaloid T3O medium pass
OsatMH6305G0028250.1 Alkaloid T3O medium pass
OsatMH6305G0031840.1 Alkaloid T3O medium borderline
OsatMH6305G0033600.1 Alkaloid T3O low borderline
OsatMH6305G0037590.1 Alkaloid T3O medium borderline
OsatMH6306G0000160.1 Alkaloid T3O medium borderline
OsatMH6306G0000800.1 Alkaloid T3O medium pass
OsatMH6306G0000800.2 Alkaloid T3O medium pass
OsatMH6306G0000800.4 Alkaloid T3O medium pass
OsatMH6306G0014820.1 Alkaloid T3O medium borderline
OsatMH6306G0020680.1 Alkaloid T3O medium borderline
OsatMH6306G0021480.1 Alkaloid T3O medium borderline
OsatMH6306G0021720.1 Alkaloid T3O medium borderline
OsatMH6306G0021720.2 Alkaloid T3O medium borderline
OsatMH6306G0021720.3 Alkaloid T3O medium borderline
OsatMH6306G0025980.1 Alkaloid T3O medium borderline
OsatMH6306G0027640.1 Alkaloid T3O medium borderline
OsatMH6306G0034310.1 Alkaloid T3O medium pass
OsatMH6306G0034310.2 Alkaloid T3O low borderline
OsatMH6306G0034310.3 Alkaloid T3O medium pass
OsatMH6306G0034700.1 Alkaloid T3O medium pass
OsatMH6306G0034700.3 Alkaloid T3O medium pass
OsatMH6306G0034760.1 Alkaloid T3O medium pass
OsatMH6306G0034760.2 Alkaloid T3O medium pass
OsatMH6306G0038610.1 Alkaloid T3O medium borderline
OsatMH6306G0040890.1 Alkaloid T3O medium borderline
OsatMH6306G0040890.2 Alkaloid T3O medium borderline
OsatMH6306G0040930.1 Alkaloid T3O medium borderline
OsatMH6306G0040950.1 Alkaloid T3O medium borderline
OsatMH6306G0040950.2 Alkaloid T3O medium borderline
OsatMH6306G0040950.3 Alkaloid T3O medium borderline
OsatMH6306G0040960.1 Alkaloid T3O medium borderline
OsatMH6306G0040960.2 Alkaloid T3O medium borderline
OsatMH6306G0040960.3 Alkaloid T3O medium borderline
OsatMH6306G0040960.4 Alkaloid T3O medium borderline
OsatMH6306G0040970.1 Alkaloid T3O medium borderline
OsatMH6306G0043660.1 Alkaloid T3O medium borderline
OsatMH6306G0044490.1 Alkaloid T3O medium pass
OsatMH6307G0020040.1 Alkaloid T3O medium borderline
OsatMH6307G0020100.1 Alkaloid T3O medium borderline
OsatMH6307G0027680.1 Alkaloid T3O medium pass
OsatMH6307G0030460.1 Alkaloid T3O medium pass
OsatMH6307G0032740.1 Alkaloid T3O medium pass
OsatMH6307G0032800.1 Alkaloid T3O medium pass
OsatMH6307G0032800.10 Alkaloid T3O medium pass
OsatMH6307G0032800.11 Alkaloid T3O medium pass
OsatMH6307G0032800.2 Alkaloid T3O medium pass
OsatMH6307G0032800.3 Alkaloid T3O low borderline