PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status
OsatMH6304G0000670.3 Terpenoid TPS medium pass
OsatMH6304G0000670.4 Terpenoid TPS medium pass
OsatMH6304G0007880.1 Terpenoid TPS medium pass
OsatMH6304G0007880.2 Terpenoid TPS medium pass
OsatMH6304G0007880.3 Terpenoid TPS medium pass
OsatMH6304G0007880.4 Terpenoid TPS medium pass
OsatMH6304G0008010.1 Terpenoid TPS medium pass
OsatMH6304G0025180.1 Terpenoid TPS medium pass
OsatMH6304G0025210.1 Terpenoid TPS medium pass
OsatMH6304G0025310.1 Terpenoid TPS medium pass
OsatMH6304G0025430.1 Terpenoid TPS medium pass
OsatMH6304G0025430.2 Terpenoid TPS medium pass
OsatMH6304G0025430.3 Terpenoid TPS medium pass
OsatMH6304G0025430.4 Terpenoid TPS medium pass
OsatMH6304G0025570.1 Terpenoid TPS medium pass
OsatMH6304G0025570.2 Terpenoid TPS medium pass
OsatMH6304G0025570.3 Terpenoid TPS medium pass
OsatMH6304G0025570.4 Terpenoid TPS medium pass
OsatMH6304G0025620.1 Terpenoid TPS medium pass
OsatMH6304G0025660.1 Terpenoid TPS medium pass
OsatMH6304G0025690.1 Terpenoid TPS medium pass
OsatMH6304G0025760.1 Terpenoid TPS medium pass
OsatMH6304G0025760.2 Terpenoid TPS medium pass
OsatMH6304G0025760.3 Terpenoid TPS medium pass
OsatMH6304G0025840.1 Terpenoid TPS medium pass
OsatMH6304G0025840.2 Terpenoid TPS medium pass
OsatMH6304G0025840.3 Terpenoid TPS medium pass
OsatMH6304G0025840.4 Terpenoid TPS medium pass
OsatMH6304G0025930.1 Terpenoid TPS medium pass
OsatMH6304G0025970.1 Terpenoid TPS medium pass
OsatMH6304G0025970.2 Terpenoid TPS medium pass
OsatMH6304G0025990.1 Terpenoid TPS medium pass
OsatMH6304G0025990.2 Terpenoid TPS medium pass
OsatMH6304G0048870.1 Terpenoid TPS medium pass
OsatMH6305G0014350.1 Terpenoid TPS medium pass
OsatMH6305G0014370.1 Terpenoid TPS medium pass
OsatMH6305G0020650.1 Terpenoid TPS medium pass
OsatMH6305G0020650.2 Terpenoid TPS medium pass
OsatMH6305G0020660.1 Terpenoid TPS medium pass
OsatMH6308G0003270.1 Terpenoid TPS medium pass
OsatMH6308G0003270.2 Terpenoid TPS medium pass
OsatMH6308G0005950.1 Terpenoid TPS medium pass
OsatMH6309G0016130.1 Terpenoid TPS medium pass
OsatMH6310G0030690.1 Terpenoid TPS medium pass
OsatMH6311G0008630.1 Terpenoid TPS low borderline
OsatMH6311G0025260.1 Terpenoid TPS low borderline
OsatMH6311G0025280.1 Terpenoid TPS medium pass
OsatMH6311G0025370.1 Terpenoid TPS medium pass
OsatMH6311G0025370.2 Terpenoid TPS medium pass
OsatMH6312G0025270.1 Terpenoid TPS medium pass