PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
OsatMH6307G0009230.1 Flavonoid UFGT medium pass
OsatMH6307G0009270.1 Flavonoid UFGT high pass
OsatMH6307G0009350.1 Flavonoid UFGT high pass
OsatMH6307G0013470.1 Flavonoid UFGT high pass
OsatMH6307G0013640.1 Flavonoid UFGT high pass
OsatMH6307G0013660.1 Flavonoid UFGT high pass
OsatMH6307G0014610.1 Flavonoid UFGT medium pass
OsatMH6307G0023340.4 Flavonoid UFGT low borderline
OsatMH6307G0023340.5 Flavonoid UFGT low borderline
OsatMH6307G0023340.6 Flavonoid UFGT low borderline
OsatMH6307G0029960.1 Flavonoid UFGT medium pass
OsatMH6307G0029970.1 Flavonoid UFGT medium pass
OsatMH6307G0030180.1 Flavonoid UFGT medium pass
OsatMH6307G0030190.1 Flavonoid UFGT medium pass
OsatMH6307G0030280.1 Flavonoid UFGT medium pass
OsatMH6307G0030290.1 Flavonoid UFGT medium pass
OsatMH6307G0031520.1 Flavonoid UFGT high pass
OsatMH6307G0031540.1 Flavonoid UFGT medium pass
OsatMH6307G0031550.1 Flavonoid UFGT medium pass
OsatMH6307G0031580.1 Flavonoid UFGT medium pass
OsatMH6307G0032080.1 Flavonoid UFGT high pass
OsatMH6307G0032090.1 Flavonoid UFGT high pass
OsatMH6307G0042230.1 Flavonoid UFGT medium pass
OsatMH6307G0042230.2 Flavonoid UFGT medium pass
OsatMH6307G0042230.3 Flavonoid UFGT medium pass
OsatMH6307G0046100.1 Flavonoid UFGT medium pass
OsatMH6308G0005970.2 Flavonoid UFGT medium pass
OsatMH6308G0005970.3 Flavonoid UFGT medium pass
OsatMH6308G0006070.1 Flavonoid UFGT medium pass
OsatMH6308G0014520.1 Flavonoid UFGT medium pass
OsatMH6308G0030550.1 Flavonoid UFGT medium pass
OsatMH6308G0038450.1 Flavonoid UFGT high pass
OsatMH6308G0038470.1 Flavonoid UFGT medium pass
OsatMH6308G0038470.2 Flavonoid UFGT medium pass
OsatMH6308G0038470.3 Flavonoid UFGT medium pass
OsatMH6308G0038500.1 Flavonoid UFGT medium pass
OsatMH6309G0001970.1 Flavonoid UFGT medium pass
OsatMH6309G0003800.1 Flavonoid UFGT low borderline
OsatMH6309G0017380.1 Flavonoid UFGT high pass
OsatMH6309G0017440.1 Flavonoid UFGT medium pass
OsatMH6309G0021640.1 Flavonoid UFGT low borderline
OsatMH6309G0031110.1 Flavonoid UFGT medium pass
OsatMH6309G0031140.1 Flavonoid UFGT medium pass
OsatMH6309G0031150.1 Flavonoid UFGT low borderline
OsatMH6309G0033950.1 Flavonoid UFGT high pass
OsatMH6309G0033960.1 Flavonoid UFGT high pass
OsatMH6309G0033960.2 Flavonoid UFGT high pass
OsatMH6309G0033960.3 Flavonoid UFGT high pass
OsatMH6309G0033960.4 Flavonoid UFGT medium pass
OsatMH6310G0002710.1 Flavonoid UFGT high pass