PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spMH63 (oryza_sativa_spmh63)

Imported from atlas release summary for Oryza sativa.spMH63.

2546
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 762 20 BAHD (305) View species results
Alkaloid pathway 596 20 7DLGT (86) View species results
Phenylpropanoid pathway 482 11 POD (254) View species results
Flavonoid pathway 332 13 UFGT (188) View species results
Steroid pathway 196 13 CAS (80) View species results
Rosmarinic acid pathway 178 7 C4H (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 546 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Gene Pathway Family Confidence Status
OsatMH6301G0000880.1 Terpenoid AACT medium borderline
OsatMH6301G0000880.2 Terpenoid AACT medium borderline
OsatMH6302G0009050.1 Terpenoid AACT low borderline
OsatMH6302G0009050.2 Terpenoid AACT low borderline
OsatMH6302G0009050.3 Terpenoid AACT low borderline
OsatMH6302G0009050.4 Terpenoid AACT low borderline
OsatMH6302G0057180.1 Terpenoid AACT medium borderline
OsatMH6306G0034700.3 Terpenoid AACT low borderline
OsatMH6309G0006850.1 Terpenoid AACT medium borderline
OsatMH6309G0006850.2 Terpenoid AACT medium borderline
OsatMH6309G0006850.3 Terpenoid AACT medium borderline
OsatMH6309G0006850.4 Terpenoid AACT medium borderline
OsatMH6309G0006850.5 Terpenoid AACT medium pass
OsatMH6310G0027830.1 Terpenoid AACT medium borderline
OsatMH6310G0027830.2 Terpenoid AACT medium borderline
OsatMH6301G0000470.1 Terpenoid BAHD medium pass
OsatMH6301G0000490.1 Terpenoid BAHD low borderline
OsatMH6301G0005360.1 Terpenoid BAHD low borderline
OsatMH6301G0005360.2 Terpenoid BAHD low borderline
OsatMH6301G0007210.1 Terpenoid BAHD medium pass
OsatMH6301G0007770.1 Terpenoid BAHD medium pass
OsatMH6301G0010220.1 Terpenoid BAHD low borderline
OsatMH6301G0013850.1 Terpenoid BAHD medium pass
OsatMH6301G0016560.2 Terpenoid BAHD medium pass
OsatMH6301G0017510.1 Terpenoid BAHD low borderline
OsatMH6301G0017610.1 Terpenoid BAHD medium pass
OsatMH6301G0018260.1 Terpenoid BAHD medium pass
OsatMH6301G0019170.1 Terpenoid BAHD medium pass
OsatMH6301G0019170.2 Terpenoid BAHD medium pass
OsatMH6301G0019170.3 Terpenoid BAHD medium pass
OsatMH6301G0019170.4 Terpenoid BAHD medium pass
OsatMH6301G0021070.1 Terpenoid BAHD medium pass
OsatMH6301G0021350.1 Terpenoid BAHD medium pass
OsatMH6301G0021370.1 Terpenoid BAHD low borderline
OsatMH6301G0021370.2 Terpenoid BAHD low borderline
OsatMH6301G0021370.3 Terpenoid BAHD low borderline
OsatMH6301G0023620.1 Terpenoid BAHD medium pass
OsatMH6301G0026770.1 Terpenoid BAHD medium pass
OsatMH6301G0037990.1 Terpenoid BAHD medium pass
OsatMH6301G0041020.1 Terpenoid BAHD medium pass
OsatMH6301G0041030.1 Terpenoid BAHD medium pass
OsatMH6301G0042190.1 Terpenoid BAHD low borderline
OsatMH6301G0042480.1 Terpenoid BAHD medium pass
OsatMH6301G0044130.1 Terpenoid BAHD medium pass
OsatMH6301G0046670.1 Terpenoid BAHD medium pass
OsatMH6301G0046670.2 Terpenoid BAHD medium pass
OsatMH6301G0046670.3 Terpenoid BAHD medium pass
OsatMH6301G0049960.1 Terpenoid BAHD medium pass
OsatMH6301G0049960.2 Terpenoid BAHD medium pass
OsatMH6301G0049960.3 Terpenoid BAHD medium pass