PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
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Gene Pathway Family Confidence Status
Pvir01KG0030250.1 Alkaloid 8HGO medium borderline
Pvir01KG0030250.2 Alkaloid 8HGO medium borderline
Pvir01KG0044010.1 Alkaloid 8HGO medium borderline
Pvir01NG0029550.1 Alkaloid 8HGO medium borderline
Pvir01NG0042490.1 Alkaloid 8HGO medium borderline
Pvir02KG0047780.1 Alkaloid 8HGO medium borderline
Pvir02NG0044340.1 Alkaloid 8HGO medium borderline
Pvir08KG0008480.1 Alkaloid 8HGO medium borderline
Pvir08KG0014410.1 Alkaloid 8HGO medium borderline
Pvir08KG0014410.2 Alkaloid 8HGO medium borderline
Pvir08KG0014410.3 Alkaloid 8HGO medium pass
Pvir08KG0014420.1 Alkaloid 8HGO medium borderline
Pvir08KG0014420.2 Alkaloid 8HGO medium borderline
Pvir08KG0014420.3 Alkaloid 8HGO medium borderline
Pvir08KG0014420.4 Alkaloid 8HGO medium borderline
Pvir08KG0014420.5 Alkaloid 8HGO medium borderline
Pvir08KG0014420.6 Alkaloid 8HGO medium borderline
Pvir08NG0011920.1 Alkaloid 8HGO medium borderline
Pvir08NG0011920.2 Alkaloid 8HGO medium borderline
Pvir08NG0011920.3 Alkaloid 8HGO medium borderline
Pvir08NG0011940.1 Alkaloid 8HGO medium borderline
Pvir08NG0011940.2 Alkaloid 8HGO medium pass
Pvir08NG0011940.3 Alkaloid 8HGO medium pass
Pvir09KG0011850.1 Alkaloid 8HGO low borderline
Pvir09KG0020370.1 Alkaloid 8HGO low borderline
Pvir09KG0020370.2 Alkaloid 8HGO low borderline
Pvir09KG0020370.3 Alkaloid 8HGO low borderline
Pvir09KG0020370.4 Alkaloid 8HGO low borderline
Pvir09KG0031070.1 Alkaloid 8HGO medium borderline
Pvir09KG0031070.2 Alkaloid 8HGO medium borderline
Pvir09KG0031070.3 Alkaloid 8HGO medium borderline
Pvir09KG0031090.1 Alkaloid 8HGO medium borderline
Pvir09KG0053710.1 Alkaloid 8HGO low borderline
Pvir09KG0055900.1 Alkaloid 8HGO medium borderline
Pvir09KG0055910.1 Alkaloid 8HGO medium borderline
Pvir09KG0055920.1 Alkaloid 8HGO medium borderline
Pvir09KG0055930.1 Alkaloid 8HGO medium borderline
Pvir09NG0020520.1 Alkaloid 8HGO low borderline
Pvir09NG0020520.3 Alkaloid 8HGO low borderline
Pvir09NG0022840.1 Alkaloid 8HGO medium pass
Pvir09NG0030310.1 Alkaloid 8HGO medium borderline
Pvir09NG0030320.1 Alkaloid 8HGO low borderline
Pvir09NG0053210.3 Alkaloid 8HGO low borderline
Pvir09NG0055370.1 Alkaloid 8HGO medium borderline
Pvir09NG0055370.2 Alkaloid 8HGO medium borderline
Pvir09NG0055380.1 Alkaloid 8HGO medium borderline
Pvir09NG0055390.1 Alkaloid 8HGO medium borderline
Pvir09NG0055390.2 Alkaloid 8HGO medium borderline
Pvir09NG0055390.3 Alkaloid 8HGO medium borderline
Pvir09NG0055410.1 Alkaloid 8HGO medium borderline