PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Family-Level Assignments
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
Pvir01KG0012310.1 Alkaloid BBE medium borderline
Pvir01NG0011260.1 Alkaloid BBE medium borderline
Pvir02KG0005090.1 Alkaloid BBE low borderline
Pvir02NG0004300.1 Alkaloid BBE low borderline
Pvir04KG0021500.1 Alkaloid BBE medium borderline
Pvir04KG0021540.1 Alkaloid BBE medium borderline
Pvir04KG0021560.1 Alkaloid BBE medium borderline
Pvir04KG0021580.1 Alkaloid BBE medium borderline
Pvir04KG0021980.1 Alkaloid BBE medium borderline
Pvir04KG0021990.1 Alkaloid BBE medium borderline
Pvir04KG0022210.1 Alkaloid BBE medium borderline
Pvir04KG0022220.1 Alkaloid BBE medium borderline
Pvir04KG0022230.1 Alkaloid BBE medium borderline
Pvir04KG0022300.1 Alkaloid BBE medium borderline
Pvir04KG0022310.1 Alkaloid BBE medium borderline
Pvir04KG0022320.1 Alkaloid BBE medium borderline
Pvir04KG0022340.1 Alkaloid BBE medium borderline
Pvir04KG0022350.1 Alkaloid BBE medium borderline
Pvir04KG0022590.1 Alkaloid BBE medium borderline
Pvir04KG0022630.1 Alkaloid BBE medium borderline
Pvir04NG0018440.1 Alkaloid BBE medium borderline
Pvir04NG0018500.1 Alkaloid BBE medium borderline
Pvir04NG0020110.1 Alkaloid BBE medium borderline
Pvir04NG0020120.1 Alkaloid BBE medium borderline
Pvir04NG0020130.1 Alkaloid BBE medium borderline
Pvir04NG0020140.1 Alkaloid BBE medium borderline
Pvir04NG0020160.1 Alkaloid BBE medium borderline
Pvir04NG0020380.1 Alkaloid BBE medium borderline
Pvir04NG0020450.1 Alkaloid BBE medium borderline
Pvir04NG0020460.1 Alkaloid BBE medium borderline
Pvir05KG0012160.1 Alkaloid BBE medium borderline
Pvir05NG0012210.1 Alkaloid BBE medium borderline
Pvir05NG0018800.1 Alkaloid BBE medium borderline
Pvir06KG0005480.1 Alkaloid BBE medium borderline
Pvir06KG0005510.1 Alkaloid BBE low borderline
Pvir06KG0005520.1 Alkaloid BBE medium borderline
Pvir06KG0006380.1 Alkaloid BBE medium borderline
Pvir06KG0027950.1 Alkaloid BBE medium borderline
Pvir06KG0027960.1 Alkaloid BBE medium borderline
Pvir06NG0005640.1 Alkaloid BBE medium borderline
Pvir06NG0005650.1 Alkaloid BBE medium borderline
Pvir06NG0014200.1 Alkaloid BBE medium borderline
Pvir06NG0026620.1 Alkaloid BBE medium borderline
Pvir07KG0003130.1 Alkaloid BBE medium borderline
Pvir07NG0005650.1 Alkaloid BBE medium borderline
Pvir08KG0017310.1 Alkaloid BBE medium borderline
Pvir08NG0014880.1 Alkaloid BBE medium borderline
Pvir08NG0014890.1 Alkaloid BBE medium borderline
Pvir09KG0054350.1 Alkaloid BBE low borderline
Pvir09NG0053880.1 Alkaloid BBE low borderline