PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Pvir08NG0008840.1 Rosmarinic Acid C4H low borderline
Pvir08NG0008840.2 Rosmarinic Acid C4H low borderline
Pvir08NG0010520.1 Rosmarinic Acid C4H low borderline
Pvir08NG0012350.1 Rosmarinic Acid C4H low borderline
Pvir08NG0024740.1 Rosmarinic Acid C4H low borderline
Pvir08NG0026010.1 Rosmarinic Acid C4H low borderline
Pvir08NG0026020.1 Rosmarinic Acid C4H low borderline
Pvir09KG0001150.1 Rosmarinic Acid C4H medium pass
Pvir09KG0002110.1 Rosmarinic Acid C4H low borderline
Pvir09KG0007930.1 Rosmarinic Acid C4H low borderline
Pvir09KG0007940.1 Rosmarinic Acid C4H medium pass
Pvir09KG0007960.1 Rosmarinic Acid C4H medium pass
Pvir09KG0007980.1 Rosmarinic Acid C4H medium pass
Pvir09KG0018350.1 Rosmarinic Acid C4H medium pass
Pvir09KG0018380.1 Rosmarinic Acid C4H low borderline
Pvir09KG0018390.1 Rosmarinic Acid C4H low borderline
Pvir09KG0018400.1 Rosmarinic Acid C4H low borderline
Pvir09KG0018410.1 Rosmarinic Acid C4H low borderline
Pvir09KG0019300.1 Rosmarinic Acid C4H low borderline
Pvir09KG0019310.1 Rosmarinic Acid C4H low borderline
Pvir09KG0019880.1 Rosmarinic Acid C4H medium pass
Pvir09KG0020210.1 Rosmarinic Acid C4H low borderline
Pvir09KG0020220.1 Rosmarinic Acid C4H low borderline
Pvir09KG0020230.1 Rosmarinic Acid C4H low borderline
Pvir09KG0020330.1 Rosmarinic Acid C4H medium pass
Pvir09KG0025560.1 Rosmarinic Acid C4H medium pass
Pvir09KG0025880.1 Rosmarinic Acid C4H low borderline
Pvir09KG0028280.1 Rosmarinic Acid C4H medium pass
Pvir09KG0029330.1 Rosmarinic Acid C4H low borderline
Pvir09KG0029900.1 Rosmarinic Acid C4H low borderline
Pvir09KG0031480.1 Rosmarinic Acid C4H medium pass
Pvir09KG0031480.2 Rosmarinic Acid C4H low borderline
Pvir09KG0031480.3 Rosmarinic Acid C4H medium pass
Pvir09KG0031480.4 Rosmarinic Acid C4H low borderline
Pvir09KG0031810.1 Rosmarinic Acid C4H low borderline
Pvir09KG0031820.1 Rosmarinic Acid C4H low borderline
Pvir09KG0031820.2 Rosmarinic Acid C4H low borderline
Pvir09KG0032350.1 Rosmarinic Acid C4H medium pass
Pvir09KG0032440.1 Rosmarinic Acid C4H medium pass
Pvir09KG0032900.1 Rosmarinic Acid C4H low borderline
Pvir09KG0038300.1 Rosmarinic Acid C4H low borderline
Pvir09KG0039000.1 Rosmarinic Acid C4H medium pass
Pvir09KG0039680.1 Rosmarinic Acid C4H medium pass
Pvir09KG0040230.1 Rosmarinic Acid C4H medium pass
Pvir09KG0042500.1 Rosmarinic Acid C4H low borderline
Pvir09KG0042510.1 Rosmarinic Acid C4H low borderline
Pvir09KG0042510.3 Rosmarinic Acid C4H low borderline
Pvir09KG0042780.1 Rosmarinic Acid C4H low borderline
Pvir09KG0043070.1 Rosmarinic Acid C4H medium pass
Pvir09KG0043150.1 Rosmarinic Acid C4H low borderline