PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Pvir09KG0043160.1 Rosmarinic Acid C4H medium pass
Pvir09KG0044350.1 Rosmarinic Acid C4H medium pass
Pvir09KG0044350.2 Rosmarinic Acid C4H medium pass
Pvir09KG0044350.3 Rosmarinic Acid C4H medium pass
Pvir09KG0044350.4 Rosmarinic Acid C4H medium pass
Pvir09KG0044350.5 Rosmarinic Acid C4H medium pass
Pvir09KG0044350.6 Rosmarinic Acid C4H medium pass
Pvir09KG0045190.1 Rosmarinic Acid C4H low borderline
Pvir09KG0046120.1 Rosmarinic Acid C4H medium pass
Pvir09KG0048450.1 Rosmarinic Acid C4H low borderline
Pvir09KG0049700.1 Rosmarinic Acid C4H low borderline
Pvir09KG0049700.2 Rosmarinic Acid C4H low borderline
Pvir09KG0049700.4 Rosmarinic Acid C4H low borderline
Pvir09KG0049710.1 Rosmarinic Acid C4H low borderline
Pvir09KG0051370.1 Rosmarinic Acid C4H medium pass
Pvir09KG0051370.2 Rosmarinic Acid C4H medium pass
Pvir09KG0052430.2 Rosmarinic Acid C4H low borderline
Pvir09KG0057530.1 Rosmarinic Acid C4H low borderline
Pvir09KG0060220.1 Rosmarinic Acid C4H medium pass
Pvir09NG0002120.1 Rosmarinic Acid C4H low borderline
Pvir09NG0008250.1 Rosmarinic Acid C4H medium pass
Pvir09NG0008260.1 Rosmarinic Acid C4H medium pass
Pvir09NG0008270.1 Rosmarinic Acid C4H medium pass
Pvir09NG0008270.2 Rosmarinic Acid C4H medium pass
Pvir09NG0008280.1 Rosmarinic Acid C4H low borderline
Pvir09NG0009660.1 Rosmarinic Acid C4H medium pass
Pvir09NG0013400.1 Rosmarinic Acid C4H medium pass
Pvir09NG0016570.1 Rosmarinic Acid C4H low borderline
Pvir09NG0016570.10 Rosmarinic Acid C4H low borderline
Pvir09NG0016570.11 Rosmarinic Acid C4H low borderline
Pvir09NG0016570.12 Rosmarinic Acid C4H low borderline
Pvir09NG0016570.13 Rosmarinic Acid C4H low borderline
Pvir09NG0016570.2 Rosmarinic Acid C4H low borderline
Pvir09NG0016570.3 Rosmarinic Acid C4H low borderline
Pvir09NG0016570.4 Rosmarinic Acid C4H low borderline
Pvir09NG0016570.5 Rosmarinic Acid C4H low borderline
Pvir09NG0016570.6 Rosmarinic Acid C4H low borderline
Pvir09NG0016570.7 Rosmarinic Acid C4H low borderline
Pvir09NG0016570.8 Rosmarinic Acid C4H low borderline
Pvir09NG0016570.9 Rosmarinic Acid C4H low borderline
Pvir09NG0018580.1 Rosmarinic Acid C4H low borderline
Pvir09NG0019360.1 Rosmarinic Acid C4H low borderline
Pvir09NG0019370.1 Rosmarinic Acid C4H low borderline
Pvir09NG0020040.1 Rosmarinic Acid C4H medium pass
Pvir09NG0020060.1 Rosmarinic Acid C4H medium pass
Pvir09NG0020370.1 Rosmarinic Acid C4H low borderline
Pvir09NG0020380.1 Rosmarinic Acid C4H low borderline
Pvir09NG0020390.1 Rosmarinic Acid C4H low borderline
Pvir09NG0020480.1 Rosmarinic Acid C4H medium pass
Pvir09NG0025290.1 Rosmarinic Acid C4H low borderline