PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Pvir09NG0025580.1 Rosmarinic Acid C4H low borderline
Pvir09NG0027810.1 Rosmarinic Acid C4H medium pass
Pvir09NG0028740.1 Rosmarinic Acid C4H low borderline
Pvir09NG0028740.2 Rosmarinic Acid C4H low borderline
Pvir09NG0029660.1 Rosmarinic Acid C4H low borderline
Pvir09NG0030680.1 Rosmarinic Acid C4H low borderline
Pvir09NG0031030.1 Rosmarinic Acid C4H low borderline
Pvir09NG0031050.1 Rosmarinic Acid C4H low borderline
Pvir09NG0031330.1 Rosmarinic Acid C4H medium pass
Pvir09NG0037540.1 Rosmarinic Acid C4H low borderline
Pvir09NG0037920.1 Rosmarinic Acid C4H low borderline
Pvir09NG0038820.1 Rosmarinic Acid C4H low borderline
Pvir09NG0039310.1 Rosmarinic Acid C4H medium pass
Pvir09NG0041860.1 Rosmarinic Acid C4H low borderline
Pvir09NG0041860.4 Rosmarinic Acid C4H low borderline
Pvir09NG0042050.1 Rosmarinic Acid C4H low borderline
Pvir09NG0042050.2 Rosmarinic Acid C4H low borderline
Pvir09NG0042480.1 Rosmarinic Acid C4H low borderline
Pvir09NG0042490.1 Rosmarinic Acid C4H medium pass
Pvir09NG0042500.1 Rosmarinic Acid C4H medium pass
Pvir09NG0042510.1 Rosmarinic Acid C4H medium pass
Pvir09NG0042510.2 Rosmarinic Acid C4H medium pass
Pvir09NG0044800.1 Rosmarinic Acid C4H low borderline
Pvir09NG0049140.1 Rosmarinic Acid C4H low borderline
Pvir09NG0049170.1 Rosmarinic Acid C4H low borderline
Pvir09NG0049190.1 Rosmarinic Acid C4H low borderline
Pvir09NG0049190.2 Rosmarinic Acid C4H low borderline
Pvir09NG0050930.1 Rosmarinic Acid C4H low borderline
Pvir09NG0052000.2 Rosmarinic Acid C4H low borderline
Pvir09NG0057050.1 Rosmarinic Acid C4H low borderline
Pvir09NG0060040.1 Rosmarinic Acid C4H low borderline
Pvir09NG0060040.2 Rosmarinic Acid C4H low borderline
Pvirscaffold_1990002330.1 Rosmarinic Acid C4H low borderline