PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Pvir01KG0019290.1 Rosmarinic Acid C4H medium pass
Pvir01KG0021210.1 Rosmarinic Acid C4H medium pass
Pvir01KG0024560.1 Rosmarinic Acid C4H low borderline
Pvir01KG0025050.1 Rosmarinic Acid C4H low borderline
Pvir01KG0025050.2 Rosmarinic Acid C4H low borderline
Pvir01KG0025060.1 Rosmarinic Acid C4H low borderline
Pvir01KG0030840.1 Rosmarinic Acid C4H low borderline
Pvir01KG0035330.1 Rosmarinic Acid C4H low borderline
Pvir01KG0044910.1 Rosmarinic Acid C4H low borderline
Pvir01NG0000550.1 Rosmarinic Acid C4H low borderline
Pvir01NG0000550.2 Rosmarinic Acid C4H low borderline
Pvir01NG0005600.1 Rosmarinic Acid C4H low borderline
Pvir01NG0006770.1 Rosmarinic Acid C4H medium pass
Pvir01NG0006890.1 Rosmarinic Acid C4H low borderline
Pvir01NG0006890.2 Rosmarinic Acid C4H low borderline
Pvir01NG0006900.1 Rosmarinic Acid C4H medium pass
Pvir01NG0008890.1 Rosmarinic Acid C4H low borderline
Pvir01NG0010120.1 Rosmarinic Acid C4H low borderline
Pvir01NG0010120.2 Rosmarinic Acid C4H low borderline
Pvir01NG0013060.1 Rosmarinic Acid C4H low borderline
Pvir01NG0014810.1 Rosmarinic Acid C4H low borderline
Pvir01NG0018420.1 Rosmarinic Acid C4H medium pass
Pvir01NG0019740.1 Rosmarinic Acid C4H low borderline
Pvir01NG0019890.1 Rosmarinic Acid C4H low borderline
Pvir01NG0019900.1 Rosmarinic Acid C4H medium pass
Pvir01NG0019900.2 Rosmarinic Acid C4H medium pass
Pvir01NG0023970.1 Rosmarinic Acid C4H low borderline
Pvir01NG0024330.1 Rosmarinic Acid C4H low borderline
Pvir01NG0024400.1 Rosmarinic Acid C4H low borderline
Pvir01NG0024470.1 Rosmarinic Acid C4H low borderline
Pvir01NG0025460.1 Rosmarinic Acid C4H low borderline
Pvir01NG0030140.1 Rosmarinic Acid C4H low borderline
Pvir01NG0034070.1 Rosmarinic Acid C4H low borderline
Pvir01NG0034070.2 Rosmarinic Acid C4H low borderline
Pvir01NG0034070.3 Rosmarinic Acid C4H low borderline
Pvir01NG0042760.1 Rosmarinic Acid C4H low borderline
Pvir01NG0042760.2 Rosmarinic Acid C4H low borderline
Pvir01NG0043330.1 Rosmarinic Acid C4H low borderline
Pvir02KG0004800.1 Rosmarinic Acid C4H medium pass
Pvir02KG0004820.1 Rosmarinic Acid C4H medium pass
Pvir02KG0004840.1 Rosmarinic Acid C4H medium pass
Pvir02KG0004880.1 Rosmarinic Acid C4H medium pass
Pvir02KG0004910.1 Rosmarinic Acid C4H medium pass
Pvir02KG0004920.1 Rosmarinic Acid C4H medium pass
Pvir02KG0007610.1 Rosmarinic Acid C4H low borderline
Pvir02KG0007620.1 Rosmarinic Acid C4H low borderline
Pvir02KG0013790.1 Rosmarinic Acid C4H low borderline
Pvir02KG0018070.1 Rosmarinic Acid C4H medium pass
Pvir02KG0018070.2 Rosmarinic Acid C4H medium pass
Pvir02KG0020950.1 Rosmarinic Acid C4H medium pass