PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Pvir02KG0020950.2 Rosmarinic Acid C4H low borderline
Pvir02KG0020980.1 Rosmarinic Acid C4H low borderline
Pvir02KG0020980.2 Rosmarinic Acid C4H low borderline
Pvir02KG0023340.1 Rosmarinic Acid C4H low borderline
Pvir02KG0024930.1 Rosmarinic Acid C4H low borderline
Pvir02KG0025680.1 Rosmarinic Acid C4H low borderline
Pvir02KG0025890.1 Rosmarinic Acid C4H low borderline
Pvir02KG0025890.2 Rosmarinic Acid C4H low borderline
Pvir02KG0026580.1 Rosmarinic Acid C4H low borderline
Pvir02KG0028060.1 Rosmarinic Acid C4H medium pass
Pvir02KG0028070.1 Rosmarinic Acid C4H medium pass
Pvir02KG0028080.1 Rosmarinic Acid C4H medium pass
Pvir02KG0028090.1 Rosmarinic Acid C4H low borderline
Pvir02KG0028100.1 Rosmarinic Acid C4H low borderline
Pvir02KG0028110.1 Rosmarinic Acid C4H medium pass
Pvir02KG0028610.1 Rosmarinic Acid C4H low borderline
Pvir02KG0029160.1 Rosmarinic Acid C4H low borderline
Pvir02KG0034980.1 Rosmarinic Acid C4H low borderline
Pvir02KG0034980.2 Rosmarinic Acid C4H low borderline
Pvir02KG0034980.3 Rosmarinic Acid C4H low borderline
Pvir02KG0035090.1 Rosmarinic Acid C4H medium pass
Pvir02KG0044580.1 Rosmarinic Acid C4H low borderline
Pvir02KG0046560.1 Rosmarinic Acid C4H medium pass
Pvir02KG0048740.1 Rosmarinic Acid C4H low borderline
Pvir02KG0049580.1 Rosmarinic Acid C4H low borderline
Pvir02KG0049770.1 Rosmarinic Acid C4H low borderline
Pvir02KG0051000.1 Rosmarinic Acid C4H medium pass
Pvir02KG0051000.2 Rosmarinic Acid C4H medium pass
Pvir02KG0051000.3 Rosmarinic Acid C4H medium pass
Pvir02KG0051960.1 Rosmarinic Acid C4H low borderline
Pvir02NG0004100.1 Rosmarinic Acid C4H medium pass
Pvir02NG0006680.1 Rosmarinic Acid C4H low borderline
Pvir02NG0011650.1 Rosmarinic Acid C4H low borderline
Pvir02NG0011650.2 Rosmarinic Acid C4H low borderline
Pvir02NG0012160.1 Rosmarinic Acid C4H low borderline
Pvir02NG0015860.1 Rosmarinic Acid C4H low borderline
Pvir02NG0018400.1 Rosmarinic Acid C4H low borderline
Pvir02NG0018430.1 Rosmarinic Acid C4H low borderline
Pvir02NG0018430.2 Rosmarinic Acid C4H low borderline
Pvir02NG0020580.1 Rosmarinic Acid C4H medium pass
Pvir02NG0020800.1 Rosmarinic Acid C4H low borderline
Pvir02NG0022280.1 Rosmarinic Acid C4H low borderline
Pvir02NG0023160.1 Rosmarinic Acid C4H low borderline
Pvir02NG0025280.1 Rosmarinic Acid C4H medium pass
Pvir02NG0025290.1 Rosmarinic Acid C4H medium pass
Pvir02NG0025290.2 Rosmarinic Acid C4H medium pass
Pvir02NG0025300.1 Rosmarinic Acid C4H medium pass
Pvir02NG0025310.1 Rosmarinic Acid C4H medium pass
Pvir02NG0025760.1 Rosmarinic Acid C4H low borderline
Pvir02NG0032210.1 Rosmarinic Acid C4H low borderline