PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Pvir03NG0021320.1 Rosmarinic Acid C4H medium pass
Pvir03NG0023080.1 Rosmarinic Acid C4H medium pass
Pvir03NG0023080.2 Rosmarinic Acid C4H medium pass
Pvir03NG0023680.1 Rosmarinic Acid C4H low borderline
Pvir03NG0024190.1 Rosmarinic Acid C4H low borderline
Pvir03NG0027400.1 Rosmarinic Acid C4H medium pass
Pvir03NG0028600.1 Rosmarinic Acid C4H low borderline
Pvir03NG0033690.1 Rosmarinic Acid C4H medium pass
Pvir03NG0034900.1 Rosmarinic Acid C4H medium pass
Pvir03NG0035010.1 Rosmarinic Acid C4H medium pass
Pvir03NG0035020.1 Rosmarinic Acid C4H low borderline
Pvir03NG0038580.1 Rosmarinic Acid C4H low borderline
Pvir03NG0038610.1 Rosmarinic Acid C4H low borderline
Pvir03NG0042960.1 Rosmarinic Acid C4H low borderline
Pvir03NG0042970.1 Rosmarinic Acid C4H medium pass
Pvir03NG0044060.1 Rosmarinic Acid C4H low borderline
Pvir03NG0044100.1 Rosmarinic Acid C4H medium pass
Pvir03NG0044130.1 Rosmarinic Acid C4H medium pass
Pvir03NG0044140.1 Rosmarinic Acid C4H low borderline
Pvir03NG0044150.1 Rosmarinic Acid C4H low borderline
Pvir03NG0044160.1 Rosmarinic Acid C4H low borderline
Pvir03NG0045860.1 Rosmarinic Acid C4H medium pass
Pvir03NG0048130.1 Rosmarinic Acid C4H medium pass
Pvir04KG0002330.1 Rosmarinic Acid C4H low borderline
Pvir04KG0002330.2 Rosmarinic Acid C4H low borderline
Pvir04KG0002330.3 Rosmarinic Acid C4H low borderline
Pvir04KG0004280.1 Rosmarinic Acid C4H low borderline
Pvir04KG0007890.1 Rosmarinic Acid C4H low borderline
Pvir04KG0007890.2 Rosmarinic Acid C4H low borderline
Pvir04KG0013800.1 Rosmarinic Acid C4H medium pass
Pvir04KG0016370.1 Rosmarinic Acid C4H low borderline
Pvir04KG0018470.1 Rosmarinic Acid C4H medium pass
Pvir04KG0021330.1 Rosmarinic Acid C4H low borderline
Pvir04KG0021330.2 Rosmarinic Acid C4H low borderline
Pvir04KG0023930.1 Rosmarinic Acid C4H low borderline
Pvir04KG0023930.2 Rosmarinic Acid C4H medium pass
Pvir04KG0025420.1 Rosmarinic Acid C4H low borderline
Pvir04KG0026560.1 Rosmarinic Acid C4H medium pass
Pvir04KG0028070.1 Rosmarinic Acid C4H low borderline
Pvir04KG0028100.1 Rosmarinic Acid C4H medium pass
Pvir04KG0028120.1 Rosmarinic Acid C4H low borderline
Pvir04KG0028140.1 Rosmarinic Acid C4H medium pass
Pvir04KG0028480.1 Rosmarinic Acid C4H low borderline
Pvir04KG0028500.1 Rosmarinic Acid C4H low borderline
Pvir04KG0031760.1 Rosmarinic Acid C4H low borderline
Pvir04KG0031760.2 Rosmarinic Acid C4H low borderline
Pvir04KG0032660.1 Rosmarinic Acid C4H low borderline
Pvir04NG0002000.1 Rosmarinic Acid C4H low borderline
Pvir04NG0002000.2 Rosmarinic Acid C4H low borderline
Pvir04NG0002000.3 Rosmarinic Acid C4H low borderline