PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Pvir04NG0002000.4 Rosmarinic Acid C4H low borderline
Pvir04NG0002000.5 Rosmarinic Acid C4H low borderline
Pvir04NG0003750.1 Rosmarinic Acid C4H low borderline
Pvir04NG0014840.1 Rosmarinic Acid C4H low borderline
Pvir04NG0014870.1 Rosmarinic Acid C4H low borderline
Pvir04NG0018420.1 Rosmarinic Acid C4H low borderline
Pvir04NG0019320.1 Rosmarinic Acid C4H low borderline
Pvir04NG0019320.2 Rosmarinic Acid C4H low borderline
Pvir04NG0019670.1 Rosmarinic Acid C4H low borderline
Pvir04NG0019670.2 Rosmarinic Acid C4H low borderline
Pvir04NG0019710.1 Rosmarinic Acid C4H low borderline
Pvir04NG0019720.1 Rosmarinic Acid C4H low borderline
Pvir04NG0019720.2 Rosmarinic Acid C4H low borderline
Pvir04NG0022260.1 Rosmarinic Acid C4H low borderline
Pvir04NG0023450.1 Rosmarinic Acid C4H medium pass
Pvir04NG0024630.1 Rosmarinic Acid C4H medium pass
Pvir04NG0024660.1 Rosmarinic Acid C4H medium pass
Pvir04NG0024710.1 Rosmarinic Acid C4H medium pass
Pvir04NG0028070.1 Rosmarinic Acid C4H low borderline
Pvir04NG0028070.2 Rosmarinic Acid C4H low borderline
Pvir05KG0001000.1 Rosmarinic Acid C4H medium pass
Pvir05KG0001010.1 Rosmarinic Acid C4H medium pass
Pvir05KG0001020.1 Rosmarinic Acid C4H medium pass
Pvir05KG0001030.1 Rosmarinic Acid C4H low borderline
Pvir05KG0001040.1 Rosmarinic Acid C4H medium pass
Pvir05KG0003430.1 Rosmarinic Acid C4H low borderline
Pvir05KG0004370.1 Rosmarinic Acid C4H low borderline
Pvir05KG0004530.1 Rosmarinic Acid C4H medium pass
Pvir05KG0005080.1 Rosmarinic Acid C4H low borderline
Pvir05KG0005080.2 Rosmarinic Acid C4H low borderline
Pvir05KG0007960.1 Rosmarinic Acid C4H low borderline
Pvir05KG0011590.1 Rosmarinic Acid C4H low borderline
Pvir05KG0011590.2 Rosmarinic Acid C4H low borderline
Pvir05KG0029300.1 Rosmarinic Acid C4H low borderline
Pvir05KG0029310.3 Rosmarinic Acid C4H low borderline
Pvir05KG0029320.1 Rosmarinic Acid C4H low borderline
Pvir05KG0029360.1 Rosmarinic Acid C4H low borderline
Pvir05KG0029360.2 Rosmarinic Acid C4H low borderline
Pvir05KG0029360.3 Rosmarinic Acid C4H low borderline
Pvir05KG0029530.1 Rosmarinic Acid C4H low borderline
Pvir05KG0029540.1 Rosmarinic Acid C4H low borderline
Pvir05KG0029540.2 Rosmarinic Acid C4H low borderline
Pvir05KG0029550.1 Rosmarinic Acid C4H low borderline
Pvir05KG0029560.1 Rosmarinic Acid C4H low borderline
Pvir05KG0029570.1 Rosmarinic Acid C4H low borderline
Pvir05KG0029580.1 Rosmarinic Acid C4H low borderline
Pvir05KG0029620.1 Rosmarinic Acid C4H low borderline
Pvir05KG0029650.1 Rosmarinic Acid C4H low borderline
Pvir05KG0034250.1 Rosmarinic Acid C4H medium pass
Pvir05KG0034300.1 Rosmarinic Acid C4H medium pass