PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Pvir05NG0041090.1 Rosmarinic Acid C4H low borderline
Pvir05NG0042420.1 Rosmarinic Acid C4H medium pass
Pvir05NG0043570.1 Rosmarinic Acid C4H low borderline
Pvir05NG0052740.1 Rosmarinic Acid C4H medium pass
Pvir06KG0000420.1 Rosmarinic Acid C4H low borderline
Pvir06KG0000440.1 Rosmarinic Acid C4H medium pass
Pvir06KG0000490.1 Rosmarinic Acid C4H medium pass
Pvir06KG0000660.1 Rosmarinic Acid C4H medium pass
Pvir06KG0000660.2 Rosmarinic Acid C4H medium pass
Pvir06KG0000660.3 Rosmarinic Acid C4H medium pass
Pvir06KG0000660.4 Rosmarinic Acid C4H medium pass
Pvir06KG0001770.1 Rosmarinic Acid C4H low borderline
Pvir06KG0001770.2 Rosmarinic Acid C4H low borderline
Pvir06KG0003560.1 Rosmarinic Acid C4H low borderline
Pvir06KG0004220.1 Rosmarinic Acid C4H medium pass
Pvir06KG0004780.1 Rosmarinic Acid C4H low borderline
Pvir06KG0004820.1 Rosmarinic Acid C4H low borderline
Pvir06KG0004840.1 Rosmarinic Acid C4H medium pass
Pvir06KG0005250.1 Rosmarinic Acid C4H low borderline
Pvir06KG0005250.2 Rosmarinic Acid C4H low borderline
Pvir06KG0006740.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006760.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006770.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006790.1 Rosmarinic Acid C4H low borderline
Pvir06KG0006800.1 Rosmarinic Acid C4H low borderline
Pvir06KG0006810.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006830.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006840.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006870.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006880.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006890.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006900.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006910.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006920.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006930.1 Rosmarinic Acid C4H low borderline
Pvir06KG0006940.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006960.1 Rosmarinic Acid C4H medium pass
Pvir06KG0006980.1 Rosmarinic Acid C4H medium pass
Pvir06KG0012430.1 Rosmarinic Acid C4H low borderline
Pvir06KG0012430.2 Rosmarinic Acid C4H low borderline
Pvir06KG0015330.1 Rosmarinic Acid C4H low borderline
Pvir06KG0016110.1 Rosmarinic Acid C4H low borderline
Pvir06KG0017160.1 Rosmarinic Acid C4H medium pass
Pvir06KG0019670.1 Rosmarinic Acid C4H low borderline
Pvir06KG0019810.1 Rosmarinic Acid C4H low borderline
Pvir06KG0020630.1 Rosmarinic Acid C4H low borderline
Pvir06KG0023210.1 Rosmarinic Acid C4H low borderline
Pvir06KG0023230.1 Rosmarinic Acid C4H medium pass
Pvir06KG0023720.1 Rosmarinic Acid C4H low borderline
Pvir06KG0029700.1 Rosmarinic Acid C4H low borderline