PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status
Pvir02NG0022990.1 Phenylpropanoid CAD medium pass
Pvir02NG0029280.1 Phenylpropanoid CAD medium borderline
Pvir03KG0009100.1 Phenylpropanoid CAD low borderline
Pvir03KG0009100.2 Phenylpropanoid CAD medium pass
Pvir03KG0009120.1 Phenylpropanoid CAD low borderline
Pvir03KG0009120.2 Phenylpropanoid CAD low borderline
Pvir03KG0044140.1 Phenylpropanoid CAD low borderline
Pvir03NG0008200.1 Phenylpropanoid CAD low borderline
Pvir03NG0008200.2 Phenylpropanoid CAD low borderline
Pvir03NG0008200.3 Phenylpropanoid CAD medium pass
Pvir03NG0008790.1 Phenylpropanoid CAD low borderline
Pvir03NG0008790.3 Phenylpropanoid CAD low borderline
Pvir03NG0035740.1 Phenylpropanoid CAD low borderline
Pvir03NG0035750.1 Phenylpropanoid CAD low borderline
Pvir03NG0035760.1 Phenylpropanoid CAD low borderline
Pvir03NG0040430.2 Phenylpropanoid CAD low borderline
Pvir03NG0040440.1 Phenylpropanoid CAD low borderline
Pvir03NG0040460.1 Phenylpropanoid CAD low borderline
Pvir03NG0040460.2 Phenylpropanoid CAD low borderline
Pvir03NG0040460.3 Phenylpropanoid CAD low borderline
Pvir04KG0027880.1 Phenylpropanoid CAD medium pass
Pvir04KG0031920.1 Phenylpropanoid CAD medium borderline
Pvir04KG0031920.2 Phenylpropanoid CAD medium borderline
Pvir04NG0024450.1 Phenylpropanoid CAD medium pass
Pvir04NG0025170.1 Phenylpropanoid CAD low borderline
Pvir04NG0028200.1 Phenylpropanoid CAD medium borderline
Pvir05KG0018170.1 Phenylpropanoid CAD low borderline
Pvir05KG0020700.1 Phenylpropanoid CAD medium borderline
Pvir05KG0021270.1 Phenylpropanoid CAD medium borderline
Pvir05KG0021270.2 Phenylpropanoid CAD medium borderline
Pvir05KG0021270.3 Phenylpropanoid CAD medium borderline
Pvir05KG0021270.4 Phenylpropanoid CAD medium borderline
Pvir05KG0021270.5 Phenylpropanoid CAD medium borderline
Pvir05KG0021270.6 Phenylpropanoid CAD medium borderline
Pvir05KG0043820.1 Phenylpropanoid CAD medium borderline
Pvir05KG0043850.1 Phenylpropanoid CAD medium borderline
Pvir05NG0018110.1 Phenylpropanoid CAD medium borderline
Pvir05NG0020090.1 Phenylpropanoid CAD medium borderline
Pvir05NG0020110.1 Phenylpropanoid CAD medium borderline
Pvir05NG0020110.2 Phenylpropanoid CAD medium borderline
Pvir05NG0026050.1 Phenylpropanoid CAD low borderline
Pvir05NG0026050.2 Phenylpropanoid CAD low borderline
Pvir05NG0026050.3 Phenylpropanoid CAD low borderline
Pvir05NG0042990.1 Phenylpropanoid CAD medium borderline
Pvir05NG0043020.1 Phenylpropanoid CAD medium borderline
Pvir05NG0043020.2 Phenylpropanoid CAD medium borderline
Pvir05NG0046080.1 Phenylpropanoid CAD low borderline
Pvir06KG0001120.1 Phenylpropanoid CAD low borderline
Pvir06KG0006300.1 Phenylpropanoid CAD low borderline
Pvir06KG0009260.1 Phenylpropanoid CAD low borderline