PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Pvir08NG0020050.2 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
Pvir08NG0025620.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0018360.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0018360.2 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0018360.3 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0027240.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0043110.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0043110.2 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0043110.3 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0043110.4 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0044060.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0044080.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0044080.2 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0044080.3 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0044080.4 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0044080.5 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0048770.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09KG0053660.1 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pvir09KG0053660.2 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pvir09NG0026920.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09NG0026920.2 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09NG0026920.3 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09NG0026920.4 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09NG0042420.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09NG0043420.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09NG0048390.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pvir09NG0048390.2 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA