PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
Pvir08NG0001660.1 Steroid CPD/CYP90A1 low borderline
Pvir08NG0001950.1 Steroid CPD/CYP90A1 medium borderline
Pvir08NG0001950.2 Steroid CPD/CYP90A1 medium borderline
Pvir08NG0010520.1 Steroid CPD/CYP90A1 medium borderline
Pvir08NG0013930.1 Steroid CPD/CYP90A1 low borderline
Pvir09KG0019000.1 Steroid CPD/CYP90A1 low borderline
Pvir09KG0030490.1 Steroid CPD/CYP90A1 low borderline
Pvir09KG0037050.1 Steroid CPD/CYP90A1 medium borderline
Pvir09KG0037050.2 Steroid CPD/CYP90A1 medium borderline
Pvir09KG0039850.1 Steroid CPD/CYP90A1 low borderline
Pvir09KG0048450.1 Steroid CPD/CYP90A1 medium borderline
Pvir09KG0053250.1 Steroid CPD/CYP90A1 low borderline
Pvir09NG0015410.1 Steroid CPD/CYP90A1 medium borderline
Pvir09NG0019150.1 Steroid CPD/CYP90A1 low borderline
Pvir09NG0029960.1 Steroid CPD/CYP90A1 low borderline
Pvir09NG0030680.1 Steroid CPD/CYP90A1 low borderline
Pvir09NG0036040.1 Steroid CPD/CYP90A1 medium borderline
Pvir09NG0036040.2 Steroid CPD/CYP90A1 medium borderline
Pvir09NG0038950.1 Steroid CPD/CYP90A1 low borderline
Pvir09NG0038950.2 Steroid CPD/CYP90A1 low borderline
Pvir09NG0052780.1 Steroid CPD/CYP90A1 low borderline