PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
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Gene Pathway Family Confidence Status
Pvir01KG0002000.1 Flavonoid DFR low borderline
Pvir01KG0043750.1 Flavonoid DFR medium pass
Pvir01KG0043760.1 Flavonoid DFR medium pass
Pvir01NG0042240.1 Flavonoid DFR medium pass
Pvir01NG0042250.1 Flavonoid DFR medium borderline
Pvir02KG0019730.1 Flavonoid DFR medium borderline
Pvir02KG0019730.2 Flavonoid DFR low borderline
Pvir02KG0032060.1 Flavonoid DFR medium borderline
Pvir02KG0032160.1 Flavonoid DFR medium borderline
Pvir02NG0029250.1 Flavonoid DFR medium borderline
Pvir02NG0029270.1 Flavonoid DFR medium borderline
Pvir02NG0029310.1 Flavonoid DFR medium borderline
Pvir02NG0029430.1 Flavonoid DFR medium borderline
Pvir02NG0043060.2 Flavonoid DFR medium borderline
Pvir02NG0043060.3 Flavonoid DFR medium borderline
Pvir04KG0003790.1 Flavonoid DFR medium pass
Pvir04KG0003800.1 Flavonoid DFR medium pass
Pvir04KG0027170.2 Flavonoid DFR medium borderline
Pvir04KG0027180.1 Flavonoid DFR medium borderline
Pvir04KG0027190.2 Flavonoid DFR low borderline
Pvir04NG0023810.1 Flavonoid DFR low borderline
Pvir04NG0023820.1 Flavonoid DFR medium borderline
Pvir04NG0025730.1 Flavonoid DFR medium borderline
Pvir04NG0028280.1 Flavonoid DFR low borderline
Pvir05KG0009160.1 Flavonoid DFR medium borderline
Pvir05KG0021270.2 Flavonoid DFR medium borderline
Pvir05KG0021270.5 Flavonoid DFR medium pass
Pvir05NG0009260.1 Flavonoid DFR medium pass
Pvir05NG0042990.2 Flavonoid DFR medium borderline
Pvir05NG0043000.1 Flavonoid DFR medium pass
Pvir05NG0043020.2 Flavonoid DFR medium pass
Pvir06KG0027150.1 Flavonoid DFR medium borderline
Pvir06NG0007560.1 Flavonoid DFR medium borderline
Pvir06NG0007560.2 Flavonoid DFR medium borderline
Pvir06NG0007560.3 Flavonoid DFR medium borderline
Pvir06NG0007560.4 Flavonoid DFR medium borderline
Pvir06NG0007560.5 Flavonoid DFR medium borderline
Pvir06NG0007560.6 Flavonoid DFR medium borderline
Pvir06NG0017320.1 Flavonoid DFR medium pass
Pvir06NG0020170.1 Flavonoid DFR medium borderline
Pvir06NG0020170.2 Flavonoid DFR medium borderline
Pvir06NG0020170.5 Flavonoid DFR medium borderline
Pvir06NG0025810.1 Flavonoid DFR medium borderline
Pvir07KG0019810.1 Flavonoid DFR medium borderline
Pvir07NG0017900.1 Flavonoid DFR medium borderline
Pvir08KG0024170.1 Flavonoid DFR low borderline
Pvir08NG0020280.1 Flavonoid DFR low borderline
Pvir08NG0020280.2 Flavonoid DFR low borderline
Pvir08NG0020280.3 Flavonoid DFR low borderline
Pvir09KG0003680.1 Flavonoid DFR medium borderline