PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Pvir02NG0020800.1 Steroid DWF4/CYP90B1 low borderline
Pvir02NG0023160.1 Steroid DWF4/CYP90B1 low borderline
Pvir02NG0025280.1 Steroid DWF4/CYP90B1 low borderline
Pvir02NG0025290.1 Steroid DWF4/CYP90B1 low borderline
Pvir02NG0025290.2 Steroid DWF4/CYP90B1 low borderline
Pvir02NG0032350.1 Steroid DWF4/CYP90B1 low borderline
Pvir02NG0032350.2 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0002530.1 Steroid DWF4/CYP90B1 medium borderline
Pvir03KG0003080.1 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0011200.1 Steroid DWF4/CYP90B1 medium borderline
Pvir03KG0022800.1 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0025330.1 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0025330.2 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0029130.1 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0030390.1 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0030620.1 Steroid DWF4/CYP90B1 medium borderline
Pvir03KG0036980.1 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0037840.1 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0047230.1 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0048320.1 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0048370.1 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0048380.1 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0048390.1 Steroid DWF4/CYP90B1 low borderline
Pvir03KG0052010.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0000590.2 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0001840.1 Steroid DWF4/CYP90B1 medium borderline
Pvir03NG0001840.2 Steroid DWF4/CYP90B1 medium borderline
Pvir03NG0002400.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0013460.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0021300.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0021320.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0023080.2 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0023680.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0027400.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0028600.1 Steroid DWF4/CYP90B1 medium borderline
Pvir03NG0030180.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0034900.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0044060.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0044100.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0044130.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0044140.1 Steroid DWF4/CYP90B1 low borderline
Pvir03NG0044150.1 Steroid DWF4/CYP90B1 low borderline
Pvir04KG0004280.1 Steroid DWF4/CYP90B1 low borderline
Pvir04KG0007890.1 Steroid DWF4/CYP90B1 low borderline
Pvir04KG0007890.2 Steroid DWF4/CYP90B1 low borderline
Pvir04KG0007890.3 Steroid DWF4/CYP90B1 low borderline
Pvir04KG0013800.1 Steroid DWF4/CYP90B1 low borderline
Pvir04KG0028070.1 Steroid DWF4/CYP90B1 low borderline
Pvir04KG0028510.1 Steroid DWF4/CYP90B1 low borderline
Pvir04KG0031760.1 Steroid DWF4/CYP90B1 low borderline