PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
Pvir06KG0020630.1 Steroid DWF4/CYP90B1 low borderline
Pvir06KG0029700.1 Steroid DWF4/CYP90B1 low borderline
Pvir06KG0030650.1 Steroid DWF4/CYP90B1 low borderline
Pvir06NG0005400.1 Steroid DWF4/CYP90B1 low borderline
Pvir06NG0005410.1 Steroid DWF4/CYP90B1 low borderline
Pvir06NG0007020.1 Steroid DWF4/CYP90B1 low borderline
Pvir06NG0007020.2 Steroid DWF4/CYP90B1 low borderline
Pvir06NG0007020.3 Steroid DWF4/CYP90B1 low borderline
Pvir06NG0007050.1 Steroid DWF4/CYP90B1 low borderline
Pvir06NG0015960.1 Steroid DWF4/CYP90B1 low borderline
Pvir06NG0017920.1 Steroid DWF4/CYP90B1 low borderline
Pvir06NG0018740.1 Steroid DWF4/CYP90B1 low borderline
Pvir06NG0029450.1 Steroid DWF4/CYP90B1 low borderline
Pvir07KG0007990.1 Steroid DWF4/CYP90B1 low borderline
Pvir07NG0003650.1 Steroid DWF4/CYP90B1 low borderline
Pvir07NG0023420.1 Steroid DWF4/CYP90B1 medium borderline
Pvir08KG0003080.1 Steroid DWF4/CYP90B1 medium borderline
Pvir08KG0015060.1 Steroid DWF4/CYP90B1 medium borderline
Pvir08KG0031520.1 Steroid DWF4/CYP90B1 low borderline
Pvir08NG0012350.1 Steroid DWF4/CYP90B1 medium borderline
Pvir08NG0024740.1 Steroid DWF4/CYP90B1 low borderline
Pvir08NG0026010.1 Steroid DWF4/CYP90B1 low borderline
Pvir08NG0026020.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0001150.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0007930.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0007940.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0007960.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0007980.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0015230.1 Steroid DWF4/CYP90B1 medium borderline
Pvir09KG0015230.2 Steroid DWF4/CYP90B1 medium borderline
Pvir09KG0015230.3 Steroid DWF4/CYP90B1 medium borderline
Pvir09KG0018350.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0018390.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0025880.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0029330.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0029330.2 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0032440.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0032900.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0039870.1 Steroid DWF4/CYP90B1 medium borderline
Pvir09KG0039870.2 Steroid DWF4/CYP90B1 medium borderline
Pvir09KG0039870.3 Steroid DWF4/CYP90B1 medium borderline
Pvir09KG0039870.4 Steroid DWF4/CYP90B1 medium borderline
Pvir09KG0040400.1 Steroid DWF4/CYP90B1 medium borderline
Pvir09KG0042500.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0042510.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0042510.2 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0042510.3 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0042510.4 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0042540.1 Steroid DWF4/CYP90B1 low borderline
Pvir09KG0042550.1 Steroid DWF4/CYP90B1 low borderline