PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Pvir01KG0000170.1 Flavonoid F3H medium borderline
Pvir01KG0029560.1 Flavonoid F3H medium borderline
Pvir01KG0040470.1 Flavonoid F3H medium borderline
Pvir01KG0040470.2 Flavonoid F3H medium borderline
Pvir01KG0040790.1 Flavonoid F3H medium borderline
Pvir01KG0040790.2 Flavonoid F3H medium borderline
Pvir01KG0040790.3 Flavonoid F3H medium borderline
Pvir01KG0040790.4 Flavonoid F3H medium borderline
Pvir01KG0040790.5 Flavonoid F3H medium borderline
Pvir01KG0044490.1 Flavonoid F3H medium borderline
Pvir01KG0044490.2 Flavonoid F3H medium borderline
Pvir01NG0028930.1 Flavonoid F3H medium borderline
Pvir01NG0028940.1 Flavonoid F3H medium borderline
Pvir01NG0039290.1 Flavonoid F3H medium borderline
Pvir01NG0039640.1 Flavonoid F3H medium borderline
Pvir01NG0039640.2 Flavonoid F3H medium borderline
Pvir01NG0039640.3 Flavonoid F3H medium borderline
Pvir02KG0000260.1 Flavonoid F3H medium pass
Pvir02KG0010510.1 Flavonoid F3H medium borderline
Pvir02KG0017510.1 Flavonoid F3H medium borderline
Pvir02KG0028750.1 Flavonoid F3H medium borderline
Pvir02KG0028770.1 Flavonoid F3H medium borderline
Pvir02NG0000220.1 Flavonoid F3H medium pass
Pvir02NG0004840.1 Flavonoid F3H medium pass
Pvir02NG0008510.1 Flavonoid F3H medium borderline
Pvir02NG0009200.1 Flavonoid F3H medium borderline
Pvir02NG0015260.1 Flavonoid F3H medium borderline
Pvir02NG0020590.1 Flavonoid F3H low borderline
Pvir02NG0024960.1 Flavonoid F3H low borderline
Pvir02NG0024960.2 Flavonoid F3H low borderline
Pvir02NG0025870.1 Flavonoid F3H medium borderline
Pvir02NG0025870.2 Flavonoid F3H medium borderline
Pvir02NG0025880.1 Flavonoid F3H medium borderline
Pvir02NG0025890.1 Flavonoid F3H medium borderline
Pvir02NG0025890.2 Flavonoid F3H medium borderline
Pvir02NG0025890.3 Flavonoid F3H medium borderline
Pvir03KG0006790.1 Flavonoid F3H medium borderline
Pvir03KG0011020.1 Flavonoid F3H medium borderline
Pvir03KG0012500.1 Flavonoid F3H medium borderline
Pvir03KG0012510.1 Flavonoid F3H medium borderline
Pvir03KG0013500.1 Flavonoid F3H medium pass
Pvir03KG0019160.1 Flavonoid F3H medium borderline
Pvir03KG0029210.1 Flavonoid F3H medium pass
Pvir03KG0039650.1 Flavonoid F3H low borderline
Pvir03KG0043510.1 Flavonoid F3H medium borderline
Pvir03NG0007390.1 Flavonoid F3H medium pass
Pvir03NG0007390.2 Flavonoid F3H low borderline
Pvir03NG0009950.1 Flavonoid F3H medium borderline
Pvir03NG0009950.2 Flavonoid F3H medium borderline
Pvir03NG0011400.1 Flavonoid F3H medium borderline