PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Pvir03NG0011410.1 Flavonoid F3H medium borderline
Pvir03NG0012130.1 Flavonoid F3H medium pass
Pvir03NG0013210.1 Flavonoid F3H medium borderline
Pvir03NG0017930.1 Flavonoid F3H medium borderline
Pvir03NG0021350.1 Flavonoid F3H medium borderline
Pvir03NG0024590.1 Flavonoid F3H medium borderline
Pvir03NG0024640.1 Flavonoid F3H medium borderline
Pvir03NG0026420.1 Flavonoid F3H medium borderline
Pvir03NG0026420.2 Flavonoid F3H medium borderline
Pvir03NG0027440.1 Flavonoid F3H medium pass
Pvir03NG0027440.2 Flavonoid F3H medium pass
Pvir03NG0027440.3 Flavonoid F3H medium pass
Pvir03NG0040280.1 Flavonoid F3H medium borderline
Pvir04KG0001970.1 Flavonoid F3H low borderline
Pvir04KG0002020.1 Flavonoid F3H medium borderline
Pvir04KG0002020.2 Flavonoid F3H medium borderline
Pvir04KG0005560.1 Flavonoid F3H medium borderline
Pvir04KG0005990.1 Flavonoid F3H medium borderline
Pvir04KG0006760.1 Flavonoid F3H medium borderline
Pvir04KG0006760.2 Flavonoid F3H medium borderline
Pvir04KG0006770.1 Flavonoid F3H medium borderline
Pvir04KG0006780.1 Flavonoid F3H medium borderline
Pvir04KG0007690.1 Flavonoid F3H medium borderline
Pvir04KG0009260.1 Flavonoid F3H medium borderline
Pvir04KG0010040.1 Flavonoid F3H medium borderline
Pvir04KG0022100.1 Flavonoid F3H low borderline
Pvir04KG0022100.2 Flavonoid F3H low borderline
Pvir04KG0022120.1 Flavonoid F3H low borderline
Pvir04KG0022120.2 Flavonoid F3H low borderline
Pvir04KG0024230.1 Flavonoid F3H medium borderline
Pvir04KG0026860.1 Flavonoid F3H medium borderline
Pvir04KG0032480.1 Flavonoid F3H low borderline
Pvir04KG0032480.2 Flavonoid F3H low borderline
Pvir04NG0001630.1 Flavonoid F3H low borderline
Pvir04NG0001700.2 Flavonoid F3H medium borderline
Pvir04NG0001700.3 Flavonoid F3H medium borderline
Pvir04NG0004840.1 Flavonoid F3H medium borderline
Pvir04NG0005730.1 Flavonoid F3H medium borderline
Pvir04NG0005750.1 Flavonoid F3H medium pass
Pvir04NG0006660.1 Flavonoid F3H medium borderline
Pvir04NG0008200.1 Flavonoid F3H medium borderline
Pvir04NG0008200.2 Flavonoid F3H medium borderline
Pvir04NG0009100.1 Flavonoid F3H low borderline
Pvir04NG0019920.1 Flavonoid F3H medium borderline
Pvir04NG0028950.1 Flavonoid F3H low borderline
Pvir04NG0028950.2 Flavonoid F3H low borderline
Pvir05KG0002470.1 Flavonoid F3H medium borderline
Pvir05KG0003940.1 Flavonoid F3H low borderline
Pvir05KG0003940.2 Flavonoid F3H low borderline
Pvir05KG0003940.3 Flavonoid F3H low borderline