PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Pvir05KG0003940.4 Flavonoid F3H low borderline
Pvir05KG0003940.5 Flavonoid F3H low borderline
Pvir05KG0004300.1 Flavonoid F3H medium borderline
Pvir05KG0004330.1 Flavonoid F3H low borderline
Pvir05KG0004930.1 Flavonoid F3H medium borderline
Pvir05KG0016030.1 Flavonoid F3H medium borderline
Pvir05KG0016040.1 Flavonoid F3H medium borderline
Pvir05KG0016040.2 Flavonoid F3H medium borderline
Pvir05KG0017800.1 Flavonoid F3H low borderline
Pvir05KG0022400.1 Flavonoid F3H medium borderline
Pvir05KG0025440.1 Flavonoid F3H medium borderline
Pvir05KG0037590.1 Flavonoid F3H low borderline
Pvir05KG0038590.1 Flavonoid F3H medium borderline
Pvir05KG0044140.1 Flavonoid F3H medium borderline
Pvir05KG0047960.1 Flavonoid F3H medium borderline
Pvir05NG0002510.1 Flavonoid F3H medium borderline
Pvir05NG0003910.1 Flavonoid F3H low borderline
Pvir05NG0003910.2 Flavonoid F3H low borderline
Pvir05NG0003910.3 Flavonoid F3H low borderline
Pvir05NG0003910.4 Flavonoid F3H low borderline
Pvir05NG0004290.1 Flavonoid F3H medium borderline
Pvir05NG0004340.1 Flavonoid F3H medium pass
Pvir05NG0005120.1 Flavonoid F3H medium borderline
Pvir05NG0005120.2 Flavonoid F3H medium borderline
Pvir05NG0009410.1 Flavonoid F3H medium borderline
Pvir05NG0015600.1 Flavonoid F3H medium borderline
Pvir05NG0015610.1 Flavonoid F3H medium borderline
Pvir05NG0015610.2 Flavonoid F3H medium borderline
Pvir05NG0017160.1 Flavonoid F3H low borderline
Pvir05NG0021030.1 Flavonoid F3H medium borderline
Pvir05NG0021030.2 Flavonoid F3H low borderline
Pvir05NG0024060.1 Flavonoid F3H medium borderline
Pvir05NG0031280.1 Flavonoid F3H medium borderline
Pvir05NG0036760.1 Flavonoid F3H low borderline
Pvir05NG0037760.1 Flavonoid F3H medium borderline
Pvir05NG0043340.1 Flavonoid F3H medium borderline
Pvir05NG0047250.1 Flavonoid F3H medium borderline
Pvir05NG0047250.2 Flavonoid F3H medium borderline
Pvir05NG0047250.3 Flavonoid F3H medium borderline
Pvir05NG0047250.4 Flavonoid F3H medium borderline
Pvir05NG0047250.5 Flavonoid F3H medium borderline
Pvir05NG0051430.1 Flavonoid F3H medium borderline
Pvir05NG0051430.2 Flavonoid F3H medium borderline
Pvir05NG0051430.3 Flavonoid F3H medium borderline
Pvir06KG0009510.1 Flavonoid F3H medium borderline
Pvir06KG0024190.1 Flavonoid F3H medium borderline
Pvir06KG0024190.2 Flavonoid F3H medium borderline
Pvir06KG0024190.3 Flavonoid F3H medium borderline
Pvir06KG0031720.1 Flavonoid F3H medium borderline
Pvir06NG0008960.1 Flavonoid F3H medium borderline