PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Pvir06NG0008960.2 Flavonoid F3H medium borderline
Pvir06NG0008960.3 Flavonoid F3H medium borderline
Pvir06NG0008960.4 Flavonoid F3H medium borderline
Pvir06NG0022660.1 Flavonoid F3H medium borderline
Pvir06NG0030640.1 Flavonoid F3H medium borderline
Pvir06NG0030940.1 Flavonoid F3H medium borderline
Pvir06NG0030940.2 Flavonoid F3H medium borderline
Pvir07KG0003280.1 Flavonoid F3H medium borderline
Pvir07KG0005650.1 Flavonoid F3H medium borderline
Pvir07KG0008270.1 Flavonoid F3H low borderline
Pvir07KG0019380.1 Flavonoid F3H medium pass
Pvir07KG0019390.1 Flavonoid F3H medium pass
Pvir07KG0019400.1 Flavonoid F3H low borderline
Pvir07KG0023260.1 Flavonoid F3H medium borderline
Pvir07KG0027720.1 Flavonoid F3H medium borderline
Pvir07KG0027730.1 Flavonoid F3H medium borderline
Pvir07KG0033120.1 Flavonoid F3H medium pass
Pvir07KG0033130.1 Flavonoid F3H medium borderline
Pvir07KG0033140.1 Flavonoid F3H low borderline
Pvir07KG0033150.1 Flavonoid F3H medium pass
Pvir07KG0034680.1 Flavonoid F3H medium borderline
Pvir07KG0035050.1 Flavonoid F3H medium borderline
Pvir07KG0035050.2 Flavonoid F3H medium borderline
Pvir07KG0035050.3 Flavonoid F3H medium borderline
Pvir07KG0035080.1 Flavonoid F3H medium borderline
Pvir07KG0035090.1 Flavonoid F3H medium borderline
Pvir07KG0035110.1 Flavonoid F3H medium borderline
Pvir07NG0005760.1 Flavonoid F3H medium pass
Pvir07NG0017450.1 Flavonoid F3H medium pass
Pvir07NG0017460.1 Flavonoid F3H medium pass
Pvir07NG0021530.1 Flavonoid F3H medium borderline
Pvir07NG0026180.1 Flavonoid F3H medium borderline
Pvir07NG0026180.2 Flavonoid F3H medium borderline
Pvir07NG0026180.3 Flavonoid F3H medium borderline
Pvir07NG0026190.1 Flavonoid F3H medium borderline
Pvir07NG0031440.1 Flavonoid F3H low borderline
Pvir07NG0031470.1 Flavonoid F3H medium pass
Pvir07NG0031470.2 Flavonoid F3H medium pass
Pvir07NG0031490.1 Flavonoid F3H medium borderline
Pvir07NG0033030.1 Flavonoid F3H medium borderline
Pvir07NG0033400.1 Flavonoid F3H medium borderline
Pvir07NG0033400.2 Flavonoid F3H medium borderline
Pvir07NG0033410.1 Flavonoid F3H medium borderline
Pvir07NG0033440.1 Flavonoid F3H medium borderline
Pvir08KG0008410.1 Flavonoid F3H medium borderline
Pvir08KG0012490.1 Flavonoid F3H medium borderline
Pvir08NG0005660.1 Flavonoid F3H medium borderline
Pvir08NG0005660.2 Flavonoid F3H medium borderline
Pvir08NG0011640.1 Flavonoid F3H medium borderline
Pvir09KG0000250.1 Flavonoid F3H medium borderline