PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Family-Level Assignments
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Pvir09KG0000530.1 Flavonoid F3H medium borderline
Pvir09KG0000610.1 Flavonoid F3H medium borderline
Pvir09KG0017390.1 Flavonoid F3H medium borderline
Pvir09KG0017390.2 Flavonoid F3H medium borderline
Pvir09KG0017400.1 Flavonoid F3H low borderline
Pvir09KG0032780.1 Flavonoid F3H medium borderline
Pvir09KG0035970.1 Flavonoid F3H medium borderline
Pvir09KG0035980.1 Flavonoid F3H medium borderline
Pvir09KG0035980.2 Flavonoid F3H medium borderline
Pvir09KG0035980.3 Flavonoid F3H medium borderline
Pvir09KG0037740.1 Flavonoid F3H medium borderline
Pvir09KG0038410.1 Flavonoid F3H low borderline
Pvir09KG0038410.2 Flavonoid F3H low borderline
Pvir09KG0038820.1 Flavonoid F3H medium borderline
Pvir09KG0040660.1 Flavonoid F3H medium borderline
Pvir09KG0040680.1 Flavonoid F3H medium borderline
Pvir09KG0040680.2 Flavonoid F3H medium borderline
Pvir09KG0043350.1 Flavonoid F3H medium borderline
Pvir09KG0048040.1 Flavonoid F3H medium borderline
Pvir09KG0048040.2 Flavonoid F3H medium borderline
Pvir09KG0061560.1 Flavonoid F3H medium borderline
Pvir09KG0061560.2 Flavonoid F3H medium borderline
Pvir09KG0062910.1 Flavonoid F3H medium borderline
Pvir09KG0062910.2 Flavonoid F3H medium borderline
Pvir09KG0062910.3 Flavonoid F3H medium borderline
Pvir09KG0062910.4 Flavonoid F3H medium borderline
Pvir09NG0000240.1 Flavonoid F3H medium borderline
Pvir09NG0000490.1 Flavonoid F3H medium pass
Pvir09NG0000490.2 Flavonoid F3H medium pass
Pvir09NG0000490.3 Flavonoid F3H medium pass
Pvir09NG0000560.1 Flavonoid F3H medium borderline
Pvir09NG0017370.1 Flavonoid F3H medium borderline
Pvir09NG0017370.2 Flavonoid F3H medium borderline
Pvir09NG0017380.1 Flavonoid F3H medium borderline
Pvir09NG0017390.1 Flavonoid F3H medium borderline
Pvir09NG0032340.1 Flavonoid F3H medium borderline
Pvir09NG0035080.1 Flavonoid F3H medium borderline
Pvir09NG0035100.1 Flavonoid F3H medium borderline
Pvir09NG0035100.2 Flavonoid F3H medium borderline
Pvir09NG0035100.3 Flavonoid F3H medium borderline
Pvir09NG0035100.4 Flavonoid F3H medium borderline
Pvir09NG0036880.1 Flavonoid F3H medium borderline
Pvir09NG0036880.2 Flavonoid F3H medium borderline
Pvir09NG0037710.1 Flavonoid F3H low borderline
Pvir09NG0038090.1 Flavonoid F3H low borderline
Pvir09NG0038100.1 Flavonoid F3H low borderline
Pvir09NG0038920.1 Flavonoid F3H low borderline
Pvir09NG0039720.1 Flavonoid F3H medium borderline
Pvir09NG0042720.1 Flavonoid F3H medium borderline
Pvir09NG0042740.1 Flavonoid F3H medium borderline