PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Family-Level Assignments
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status
Pvir06KG0009260.3 Alkaloid GES medium pass
Pvir06KG0009260.4 Alkaloid GES medium pass
Pvir06KG0009260.5 Alkaloid GES medium pass
Pvir06KG0009350.2 Alkaloid GES low borderline
Pvir06KG0018570.1 Alkaloid GES low borderline
Pvir06NG0003910.1 Alkaloid GES low borderline
Pvir06NG0003910.2 Alkaloid GES low borderline
Pvir06NG0003980.1 Alkaloid GES medium pass
Pvir06NG0006580.1 Alkaloid GES medium pass
Pvir06NG0006580.2 Alkaloid GES low borderline
Pvir06NG0006600.1 Alkaloid GES medium pass
Pvir06NG0006610.1 Alkaloid GES low borderline
Pvir06NG0006620.1 Alkaloid GES medium pass
Pvir06NG0008820.1 Alkaloid GES low borderline
Pvir06NG0010660.1 Alkaloid GES medium pass
Pvir06NG0010660.2 Alkaloid GES medium pass
Pvir06NG0010660.3 Alkaloid GES medium pass
Pvir06NG0018850.1 Alkaloid GES medium pass
Pvir06NG0018850.2 Alkaloid GES medium pass
Pvir06NG0018850.3 Alkaloid GES medium pass
Pvir06NG0018850.4 Alkaloid GES medium pass
Pvir06NG0031380.1 Alkaloid GES medium pass
Pvir06NG0031380.2 Alkaloid GES medium pass
Pvir07KG0010350.1 Alkaloid GES medium pass
Pvir07KG0010350.2 Alkaloid GES medium pass
Pvir07KG0010350.3 Alkaloid GES medium pass
Pvir07KG0010350.4 Alkaloid GES medium pass
Pvir07KG0010350.5 Alkaloid GES medium pass
Pvir07KG0010350.6 Alkaloid GES medium pass
Pvir07KG0030420.1 Alkaloid GES medium pass
Pvir07KG0030420.2 Alkaloid GES medium pass
Pvir07KG0030420.3 Alkaloid GES medium pass
Pvir07KG0030420.4 Alkaloid GES medium pass
Pvir07KG0030420.5 Alkaloid GES medium pass
Pvir07KG0030420.6 Alkaloid GES medium pass
Pvir07KG0030420.7 Alkaloid GES low borderline
Pvir07KG0030420.8 Alkaloid GES medium pass
Pvir07NG0003640.1 Alkaloid GES medium pass
Pvir07NG0013530.1 Alkaloid GES medium pass
Pvir07NG0028560.1 Alkaloid GES medium pass
Pvir07NG0028570.1 Alkaloid GES medium pass
Pvir07NG0028570.10 Alkaloid GES medium pass
Pvir07NG0028570.2 Alkaloid GES medium pass
Pvir07NG0028570.3 Alkaloid GES medium pass
Pvir07NG0028570.4 Alkaloid GES medium pass
Pvir07NG0028570.5 Alkaloid GES medium pass
Pvir07NG0028570.6 Alkaloid GES medium pass
Pvir07NG0028570.7 Alkaloid GES medium pass
Pvir07NG0028570.8 Alkaloid GES medium pass
Pvir07NG0028570.9 Alkaloid GES medium pass