PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
Pvir08KG0011330.1 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Pvir08KG0019160.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir08KG0019170.1 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Pvir08KG0032150.1 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Pvir08NG0018110.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir08NG0025620.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pvir09KG0018360.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pvir09KG0018360.2 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pvir09KG0018360.3 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pvir09KG0027240.1 Alkaloid GES low borderline GES__00010__sp_Q93YV0_GES_ARATH
Pvir09KG0043110.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09KG0043110.2 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09KG0043110.3 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09KG0043110.4 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09KG0044040.1 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09KG0044060.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09KG0044080.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09KG0044080.2 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09KG0044080.3 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09KG0044080.4 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09KG0044080.5 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09KG0048770.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pvir09NG0018540.1 Alkaloid GES low borderline GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Pvir09NG0026920.1 Alkaloid GES low borderline GES__00010__sp_Q93YV0_GES_ARATH
Pvir09NG0026920.2 Alkaloid GES low borderline GES__00010__sp_Q93YV0_GES_ARATH
Pvir09NG0026920.3 Alkaloid GES low borderline GES__00010__sp_Q93YV0_GES_ARATH
Pvir09NG0026920.4 Alkaloid GES low borderline GES__00010__sp_Q93YV0_GES_ARATH
Pvir09NG0038940.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09NG0039580.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09NG0042420.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09NG0043420.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09NG0043450.1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Pvir09NG0048390.1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Pvir09NG0048390.2 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE