PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
Reset
Protein/Isoform Record Pathway Family Confidence Status
Pvir01KG0007870.1 Alkaloid GS high pass
Pvir01KG0007870.2 Alkaloid GS medium pass
Pvir01KG0007870.3 Alkaloid GS high pass
Pvir01KG0043380.1 Alkaloid GS low borderline
Pvir01KG0043380.2 Alkaloid GS low borderline
Pvir01NG0007000.1 Alkaloid GS high pass
Pvir01NG0007000.10 Alkaloid GS medium pass
Pvir01NG0007000.2 Alkaloid GS high pass
Pvir01NG0007000.3 Alkaloid GS high pass
Pvir01NG0007000.4 Alkaloid GS high pass
Pvir01NG0007000.5 Alkaloid GS high pass
Pvir01NG0007000.6 Alkaloid GS high pass
Pvir01NG0007000.7 Alkaloid GS high pass
Pvir01NG0007000.8 Alkaloid GS high pass
Pvir01NG0007000.9 Alkaloid GS high pass
Pvir01NG0041930.1 Alkaloid GS low borderline
Pvir01NG0041930.2 Alkaloid GS low borderline
Pvir02KG0025660.1 Alkaloid GS high pass
Pvir02KG0025670.1 Alkaloid GS high pass
Pvir02KG0025690.1 Alkaloid GS high pass
Pvir02KG0025710.1 Alkaloid GS high pass
Pvir02KG0025710.2 Alkaloid GS high pass
Pvir02KG0025710.3 Alkaloid GS high pass
Pvir02KG0032810.1 Alkaloid GS low borderline
Pvir02KG0032840.2 Alkaloid GS low borderline
Pvir02NG0022980.1 Alkaloid GS medium pass
Pvir02NG0022990.1 Alkaloid GS high pass
Pvir02NG0026550.5 Alkaloid GS low borderline
Pvir02NG0026550.6 Alkaloid GS low borderline
Pvir02NG0026550.9 Alkaloid GS low borderline
Pvir02NG0030040.1 Alkaloid GS low borderline
Pvir02NG0030090.1 Alkaloid GS low borderline
Pvir03KG0036860.2 Alkaloid GS low borderline
Pvir03NG0033940.1 Alkaloid GS low borderline
Pvir03NG0033940.2 Alkaloid GS low borderline
Pvir04KG0027880.1 Alkaloid GS medium pass
Pvir04NG0024450.1 Alkaloid GS high pass
Pvir05KG0038250.1 Alkaloid GS low borderline
Pvir05NG0037420.1 Alkaloid GS low borderline
Pvir06KG0001120.1 Alkaloid GS medium pass
Pvir06KG0009760.1 Alkaloid GS medium pass
Pvir06KG0009820.1 Alkaloid GS high pass
Pvir06KG0009840.1 Alkaloid GS high pass
Pvir06KG0009840.2 Alkaloid GS high pass
Pvir06KG0017670.1 Alkaloid GS low borderline
Pvir06KG0018610.1 Alkaloid GS medium pass
Pvir06KG0030320.1 Alkaloid GS medium pass
Pvir06KG0030320.2 Alkaloid GS medium pass
Pvir06KG0030320.3 Alkaloid GS medium pass
Pvir06KG0030320.4 Alkaloid GS medium pass