PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status
Pvir07NG0019460.2 Phenylpropanoid HCT medium pass
Pvir07NG0019480.1 Phenylpropanoid HCT medium pass
Pvir07NG0028320.1 Phenylpropanoid HCT low borderline
Pvir08KG0009900.1 Phenylpropanoid HCT low borderline
Pvir08KG0009990.1 Phenylpropanoid HCT low borderline
Pvir08KG0010030.1 Phenylpropanoid HCT low borderline
Pvir08KG0014390.1 Phenylpropanoid HCT low borderline
Pvir08KG0014400.1 Phenylpropanoid HCT low borderline
Pvir08KG0014480.1 Phenylpropanoid HCT medium pass
Pvir08KG0014560.1 Phenylpropanoid HCT medium pass
Pvir08KG0014590.1 Phenylpropanoid HCT medium pass
Pvir08KG0017980.1 Phenylpropanoid HCT medium pass
Pvir08KG0019720.1 Phenylpropanoid HCT low borderline
Pvir08KG0019720.2 Phenylpropanoid HCT medium pass
Pvir08KG0019740.1 Phenylpropanoid HCT low borderline
Pvir08KG0028850.1 Phenylpropanoid HCT medium pass
Pvir08NG0006170.1 Phenylpropanoid HCT low borderline
Pvir08NG0011390.1 Phenylpropanoid HCT low borderline
Pvir08NG0011820.1 Phenylpropanoid HCT low borderline
Pvir08NG0011960.1 Phenylpropanoid HCT medium pass
Pvir08NG0014860.1 Phenylpropanoid HCT low borderline
Pvir08NG0015200.1 Phenylpropanoid HCT medium pass
Pvir08NG0016390.1 Phenylpropanoid HCT medium pass
Pvir08NG0016390.2 Phenylpropanoid HCT medium pass
Pvir08NG0021890.1 Phenylpropanoid HCT medium pass
Pvir08NG0026340.1 Phenylpropanoid HCT medium pass
Pvir09KG0021080.1 Phenylpropanoid HCT medium pass
Pvir09KG0030350.1 Phenylpropanoid HCT low borderline
Pvir09KG0031230.1 Phenylpropanoid HCT medium pass
Pvir09KG0032530.1 Phenylpropanoid HCT medium pass
Pvir09NG0002290.1 Phenylpropanoid HCT low borderline
Pvir09NG0029000.1 Phenylpropanoid HCT low borderline
Pvir09NG0031430.1 Phenylpropanoid HCT medium pass