PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

5617
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
Reset
Gene Pathway Family Confidence Status
Pvir03KG0039120.2 Flavonoid IFR low borderline
Pvir03NG0008260.1 Flavonoid IFR low borderline
Pvir03NG0014730.1 Flavonoid IFR low borderline
Pvir03NG0031270.1 Flavonoid IFR low borderline
Pvir03NG0031270.2 Flavonoid IFR low borderline
Pvir03NG0034760.1 Flavonoid IFR high pass
Pvir03NG0034760.2 Flavonoid IFR high pass
Pvir03NG0034760.3 Flavonoid IFR high pass
Pvir03NG0034760.4 Flavonoid IFR high pass
Pvir03NG0034760.5 Flavonoid IFR high pass
Pvir03NG0034760.6 Flavonoid IFR high pass
Pvir03NG0034770.1 Flavonoid IFR high pass
Pvir03NG0035960.1 Flavonoid IFR low borderline
Pvir03NG0035960.2 Flavonoid IFR low borderline
Pvir03NG0035960.3 Flavonoid IFR low borderline
Pvir03NG0035960.4 Flavonoid IFR low borderline
Pvir03NG0035960.6 Flavonoid IFR low borderline
Pvir03NG0035960.7 Flavonoid IFR low borderline
Pvir03NG0035960.8 Flavonoid IFR low borderline
Pvir03NG0035960.9 Flavonoid IFR low borderline
Pvir03NG0048350.1 Flavonoid IFR high pass
Pvir04KG0013200.1 Flavonoid IFR low borderline
Pvir04KG0013200.2 Flavonoid IFR low borderline
Pvir04KG0016150.1 Flavonoid IFR high pass
Pvir04KG0017330.1 Flavonoid IFR high pass
Pvir04KG0017330.2 Flavonoid IFR high pass
Pvir04KG0033820.1 Flavonoid IFR low borderline
Pvir04NG0012090.1 Flavonoid IFR low borderline
Pvir04NG0030390.1 Flavonoid IFR low borderline
Pvir05KG0011000.1 Flavonoid IFR medium pass
Pvir05KG0011010.1 Flavonoid IFR high pass
Pvir05KG0011020.1 Flavonoid IFR high pass
Pvir05KG0011020.2 Flavonoid IFR high pass
Pvir05KG0011020.3 Flavonoid IFR high pass
Pvir05KG0011020.4 Flavonoid IFR high pass
Pvir05KG0011020.5 Flavonoid IFR high pass
Pvir05KG0011020.6 Flavonoid IFR high pass
Pvir05KG0017020.1 Flavonoid IFR low borderline
Pvir05KG0017020.2 Flavonoid IFR low borderline
Pvir05KG0023360.1 Flavonoid IFR medium pass
Pvir05KG0023360.2 Flavonoid IFR medium pass
Pvir05KG0023360.3 Flavonoid IFR medium pass
Pvir05KG0023360.4 Flavonoid IFR medium pass
Pvir05KG0044560.1 Flavonoid IFR low borderline
Pvir05NG0010940.1 Flavonoid IFR high pass
Pvir05NG0010950.1 Flavonoid IFR high pass
Pvir05NG0010950.2 Flavonoid IFR high pass
Pvir05NG0010960.1 Flavonoid IFR high pass
Pvir05NG0010960.2 Flavonoid IFR high pass
Pvir05NG0010960.3 Flavonoid IFR high pass